ODU Digital Commons

Metals and Metal Complexes in Diseases with a Focus on COVID-19: Facts and Opinions, Agnieszka Ścibior, Manuel Aureliano, Alvin A. Holder, Juan Llopis
Chemistry & Biochemistry Faculty Publications

E-Cadherin Force Transmission and Stiffness Sensing, Mazen Mezher
Mechanical & Aerospace Engineering Theses & Dissertations

Nanosecond Pulsed Electric Field Modulates Electron Transport and Mitochondrial Structure and Function, Lucas Nelson Potter
Biomedical Engineering Theses & Dissertations

Synthesis, Characterization, and Cytotoxicity Studies of a Copper(II) Complex with vanillin 3-ethyl-thiosemcarbazone a Ligand, Novia Mann, Ifeoluwa Oyeyemi, Duaa R. Alajroush, Elizabeth A. Tonsel-White, Stephen J. Beebe, Alvin Holder
Undergraduate Research Symposium

Observations of Lolliguncula brevis Schooling in Laboratory Settings, John Paul J. Cross, Alissa Ganley, Ian K. Bartol
Undergraduate Research Symposium

Par-4: An Attractive Target for Cancer Therapy, Krishna K. Raut, Antoine Baudin, David S. Libich, Lijun Liu, Scott Lovell, Steven M. Pascal
College of Sciences Posters

Characterization of Cl-Par-4: WT vs. Mutant, Samjhana Pandey, Krishna K. Raut, Andrea M. Clark, Antoine Baudin, Lamya Djemri, David S. Libich, Steven M. Pascal
The Graduate School Posters

Using nsPEFs to Sensitize MRSA to Vancomycin Treatment, Areej Malik, Alexandra E. Chittams-Miles, Claudia Muratori, Erin B. Purcell
The Graduate School Posters

T-Cell Antigen Receptors in Multiple Sclerosis, Lisa Lanée Keyes Jones
Biomedical Sciences Theses & Dissertations

Investigating the Biorisk of Genetically Engineered Thermosynechococcus Elongatus BP1, Cherrelle Leah Barnes
Chemistry & Biochemistry Theses & Dissertations

Clostridioides Difficile Biofilm and Spore Production in Response to Antibiotics and Immune Stress, Adenrele M. Oludiran
Chemistry & Biochemistry Theses & Dissertations

A Pathway to Solving the Structure of cl-Par-4 Tumor Suppressor Protein: Challenges & Findings, Krishna Raut, Samjhana Pandey, Andrea M. Clark, Komala Ponniah, Steven M. Pascal
College of Sciences Posters

Investigation of Magnesium Cation-proton Exchange with Transmembrane Electrostatically Localized Protons (TELP) at a Liquid-membrane Interface: Fundamental to Bioenergetics, Gyanendra Kharel, Andrew J. Evans, Christopher M. Russo, Michael Eason, James W. Lee
College of Sciences Posters

Natural Phaeosphaeride A Derivatives Overcome Drug Resistance of Tumor Cells and Modulate Signaling Pathways, Victoria Abzianidze, Natalia Moiseeva, Diana Suponina, Sofya Zakharenkova, Nadezhda Rogovskaya, Lidia Laletina, Alvin A. Holder, Denis Krivorotov, Alexander Bogachenkov, Alexander Garabadzhiu, Anton Ukolov, Vyacheslav Kosorukov
Chemistry & Biochemistry Faculty Publications

Lateral Flow Assay for Prostate Cancer Diagnosis, Taryn Amos, Alexis Moody, Gymama Slaughter
Undergraduate Research Symposium

Reduction of the Plasmid Vector Backbone Length Enhances Reporter Gene Expression, Aislin West, Anna Bulysheva
Undergraduate Research Symposium

Microbial Labilization and Diversification of Pyrogenic Dissolved Organic Matter, Aleksandar I. Goranov, Andrew S. Wozniak, Kyle W. Bostick, Andrew R. Zimmerman, Siddhartha Mitra, Patrick G. Hatcher
Chemistry & Biochemistry Faculty Publications

Coastal Upwelling Enhances Abundance of a Symbiotic Diazotroph (UCYN-A) and Its Haptophyte Host in the Arctic Ocean, Corday R. Selden, Sveinn V. Einarsson, Kate E. Lowry, Katherine E. Crider, Robert S. Pickart, Peigen Lin, Carin J. Ashjian, P. Dreux Chappell
OES Faculty Publications

Type-B Energetic Processes and Their Associated Scientific Implications, James Weifu Lee
Chemistry & Biochemistry Faculty Publications

3D Bioprinting and Implantation of Mouse Mammary Epithelial Structures Using a Custom Accessible 3D Bioprinting Platform, Xavier-Lewis Palmer, Saad Jafri, Patrick C. Sachs, Robert D. Bruno
College of Engineering & Technology (Batten) Posters

3D Bioprinted Structures from Cells of Non-Epithelial Mesodermal and Endodermal Lineage Using a Custom Accessible 3D Bioprinting Platform, Xavier-Lewis Palmer, Annette Berkin, Patrick C. Sachs, Robert D. Bruno
College of Engineering & Technology (Batten) Posters

Genetically Engineered Thermosynechococcus Elongatus BP1: Assessment of Potential Biorisks and Biofuel Production, Thu Ho Anh Nguyen-Jones
Chemistry & Biochemistry Theses & Dissertations

Mechanisms of Stress Survival in Gram Positive Bacterial Pathogens, Asia Poudel
Chemistry & Biochemistry Theses & Dissertations

Computational Analysis of Type 3 Iodothyronine Deiodinase: Potential Inhibitors, Substrate Binding, and Dimer Structure, Eric Scott Marsan
Chemistry & Biochemistry Theses & Dissertations

Evaluation of Horizontal Gene Transfer Between Genetically Engineered Cyanobacteria and Gram-Negative Bacteria, Andriana Chrysovalanti Zourou
Chemistry & Biochemistry Theses & Dissertations

Improvement of Biochar Through Ozonization and Biosafety of Genetically Engineered Cyanobacteria, Oumar Sacko
Chemistry & Biochemistry Theses & Dissertations

Electrohydrodynamic Simulations of Capsule Deformation Using a Dual Time-Stepping Lattice Boltzmann Scheme, Charles Leland Armstrong
Mathematics & Statistics Theses & Dissertations

Computational and Experimental Investigation into the Determinants of Protein Structure, Folding, and Stability in the β-Grasp Superfamily, John T. Bedford II
Chemistry & Biochemistry Theses & Dissertations

Evaluating the Role of the Stringent Response Mechanism in Clostridioides difficile Survival and Pathogenesis, Astha Pokhrel
Chemistry & Biochemistry Theses & Dissertations

Anaplasma Phagocytophilum Modulates Mammalian and Arthropod Signaling for Its Survival and Transmission, Supreet Khanal
Biomedical Sciences Theses & Dissertations

Biophysical Characterization of the Par-4 Tumor Suppressor: Evidence of Structure Outside the Coiled Coil Domain and Interactions with Platinum Chemotherapeutics, Andrea Megan Clark
Chemistry & Biochemistry Theses & Dissertations

A Test of Rad Capture Sequencing on Ethanol-Preserved Centennial and Contemporary Specimens of Philippine Fishes, Madeleine I. Kenton
Biological Sciences Theses & Dissertations

Influence of Monovalent and Divalent Ions in the Conformational Change of Caspase-Cleaved Par-4 (cl-Par-4) Tumor Suppressor Protein, Krishna K. Raut, Komala Ponniah, Steven M. Pascal
College of Sciences Posters

Cyclophilin D Is a Sensor of Nano-Pulse Stimulation, Brittney Ruedlinger, Bani Hani Maisoun, Lucas Potter, Nicola Lai, Stephen J. Beebe
The Graduate School Posters

Evaluating Anticancer Activity of a Cobalt(III) Complex with a Thiosemicarbazone Ligand Against Triple Negative Breast Cancer Cells, Lindsay C. Days, Duaa R. Alajroush, Chloe B. Smith, Jessa Faye Arca, Khadija Faye, Floyd A. Beckford, Stephen J. Beebe, Alvin A. Holder
Undergraduate Research Symposium

Methylation of the D2 Dopamine Receptor Affects Binding With The Human Regulatory Proteins Par-4 and Calmodulin, Alexander Bowitch, Ansuman Sahoo, Andrea M. Clark, Christiana Ntangka, Krishna K. Raut, Paul Gollnick, Michael C. Yu, Steven M. Pascal, Sarah E. Walker, Denise M. Ferkey
Chemistry & Biochemistry Faculty Publications

Dietary Protein Content and Digestibility Influences Discrimination of Amino Acid Nitrogen Isotope Values in a Terrestrial Omnivorous Mammal, John P. Whiteman, Mauriel Rodriguez Curras, Kelli L. Feeser, Seth D. Newsome
Biological Sciences Faculty Publications

Scaling the Effects of Ocean Acidification on Coral Growth and Coral-Coral Competition on Coral Community Recovery, Nicolas R. Evensen, Yves-Marie Bozec, Peter J. Edmunds, Peter J. Mumby
Biological Sciences Faculty Publications

Detrital Neodymium and (Radio)Carbon as Complementary Sedimentary Bedfellows? The Western Arctic Ocean as a Testbed, Melissa S. Schwab, Jörg D. Rickli, Robie W. MacDonald, H. Rodger Harvey, Negar Haghipour, Timothy I. Eglinton
OES Faculty Publications

Adenosine Triphosphate (ATP) as a Metric of Microbial Biomass in Aquatic Systems: New Simplified Protocols, Laboratory Validation, and a Reflection on Data From the Literature, Alexander B. Bochdansky, Alison N. Stouffer, NyJaee N. Washington
OES Faculty Publications

Marine Phytoplankton Functional Types Exhibit Diverse Responses to Thermal Change, S. I. Anderson, A. D. Barton, Sophie Clayton, S. Dutkiewicz, T. A. Rynearson
OES Faculty Publications

Structual Analysis of the cl-Par-4 Tumor Suppressor as a Function of Ionic Environment, Krishna K. Raut, Komala Ponniah, Steven M. Pascal
Chemistry & Biochemistry Faculty Publications

Copper and Cobalt Metal Conjugation Enhances Flaviviral Replication, and DENV/ZIKV Caused Thrombocytopenia Suppresses Integrin Signaling, Shovan Dutta
Biomedical Sciences Theses & Dissertations

Drivers of Rickettsial Pathogen Transmission and Spillover in Local Tick Populations in Southeastern Virginia, Alexandra Cumbie
Biomedical Sciences Theses & Dissertations

Not Too Hot, Not Too Cold, But Moderately Variable: The Influence of Environmental Variability on Coral Thermal Tolerance, Courtney Nicole Klepac
Biological Sciences Theses & Dissertations

Biomechanical and Biophysical Properties of Breast Cancer Cells under Varying Glycemic Regimens, Diganta Dutta, Xavier-Lewis Palmer, Jose Ortega-Rodas, Vasundhara Balraj, Indrani Ghosh Dastider, Surabhi Chandra
Electrical & Computer Engineering Faculty Publications

Validation of Nanosecond Pulse Cancellation Using a Quadrupole Exposure System, Hollie A. Ryan
Biomedical Engineering Theses & Dissertations

Secretion of Proteins and Antibody Fragments From Transiently Transfected Endothelial Progenitor Cells, Loree Heller, Reynald Thinard, Melanie Chevalier, Sezgi Arpag, Yu Jing, Ruth Greferath, Richard Heller, Claude Nicolau
Bioelectrics Publications

Myeloid-Derived Suppressor Cells Infiltration in Non-Small-Cell Lung Cancer Tumor and MAGE-A4 and NY-ESO-1 Expression, Zhenbo Hou, Xiao Liang, Xinmei Wang, Ziqiang Zhou, Guilan Shi
Bioelectrics Publications

Protonic Capacitor: Elucidating the Biological Significance of Mitochondrial Cristae Formation, James Weifu Lee
Chemistry & Biochemistry Faculty Publications

Probing Nanoelectroporation and Resealing of the Cell Membrane by the Entry of Ca²⁺ and Ba²⁺ Ions, Wenfei Bo, Mantas Silkunas, Uma Mangalanathan, Vitalij Novickij, Maura Casciola, Iurii Semenov, Shu Xiao, Olga N. Pakhomova, Andrei G. Pakhomov
Bioelectrics Publications

Size-Dependent Inhibitory Effects of Antibiotic Nanocarriers on Filamentation of E. coli, Preeyaporn Songkiatisak, Feng Ding, Pavan Kumar Cherukuri, Xiao-Hong Nancy Xu
Chemistry & Biochemistry Faculty Publications

Network Approaches to Elucidate the Determinants of Protein Topology and Stability, Zeinab Haratipour
Chemistry & Biochemistry Theses & Dissertations

Impedance Analysis of Tissues in nsPEF Treatment for Cancer Therapy, Edwin Ayobami Oshin
Biomedical Engineering Theses & Dissertations

Cylindrical Similarity Measurement for Helices in Medium-Resolution Cryo-Electron Microscopy Density Maps, Salim Sazzed, Peter Scheible, Maytha Alshammari, Willy Wriggers, Jing He
College of Sciences Posters

NPGREAT: Hybrid Assembly of Human Subtelomeres with the Use of Nanopore and Linked-Read Datasets, Eleni Adam, Desh Ranjan, Harold Riethman
College of Sciences Posters

A Halogen Bonding Perspective on Iodothyronine Deiodinase Activity, Eric S. Marsan, Craig A. Bayse
Chemistry & Biochemistry Faculty Publications

Single-Cell Characterization of Clostridioidies difficile Motility Using Anaerobic Live Cell Microscopy, Alden Rinehold, Erin Purcell, David S. Courson, Astha Pohkrel, Rita Tamayo, Melissa Madrill
Undergraduate Research Symposium

Quantification of Density Fit of Atomic Model to Helices in 3D Cryo-Electron Microscopy Images, Peter Scheible, Salim Sazzed, Maytha Alshammari, Jing He, Willy Wriggers
Undergraduate Research Symposium

The Regulation and Characterization of the Clostridioides difficile Infection Through the Stringent Response Mechanism, Anthony Resek, Astha Pohkrel, Mariam Mhanna, Erin Purcell
Undergraduate Research Symposium

Biophysical Characterization of the Full-Length Par-4 Tumor Suppressor, Christiana Ntangka, Andrea M. Clark, Krishna Raut, Komala Ponniah, Steven M. Pascal
Undergraduate Research Symposium

Characterizing the Activity of Antimicrobial Peptides Against the Pathogenic Bacterium Clostridium difficile in an Anaerobic Environment, Kwincy Alleyne, Mayriam Cotton, Erin Purcell, David Courson, Adenrele Oludiran
Undergraduate Research Symposium

Outlier Profiles of Atomic Structures Derived From X-ray Crystallography and From Cryo-electron Microscopy, Lin Chen, Jing He, Angelo Facchiano
Computer Science Faculty Publications

Can The Carbon and Nitrogen Isotope Values of Offspring be Used as a Proxy for Their Mother's Diet? Using Foetal Physiology to Interpret Bulk Tissue and Amino Acid δ¹⁵N Values, Nico Lübcker, John P. Whiteman, Seth D. Newsome, Robert P. Millar, P.J. Nico de Bruyn
Biological Sciences Faculty Publications

Antibiotic Drug Nanocarriers for Probing of Multidrug ABC Membrane Transporter of Bacillus subtilis, Pavan Kumar Cherukuri, Preeyaporn Songkiatisak, Feng Ding, Jeam-Michel Jault, Xiao-Hong Nancy Xu
Chemistry & Biochemistry Faculty Publications

Isothermal Environmental Heat Energy Utilization by Transmembrane Electrostatically Localized Protons at the Liquid-Membrane Interface, James Weifu Lee
Chemistry & Biochemistry Faculty Publications

DeepEP: A Deep Learning Framework for Identifying Essential Proteins, Min Zeng, Min Li, Fang-Xiang Wu, Yaohang Li, Yi Pan
Computer Science Faculty Publications

Electropermeabilization Does Not Correlate with Plasma Membrane Lipid Oxidation, Olga Michel, Andrei G. Pakhomov, Maura Casciola, Jolanta Saczko, Julita Kulbacka, Olga N. Pakhomova
Bioelectrics Publications

Label-Free MicroRNA Optical Biosensors, Meimei Lai, Gymama Slaughter
Bioelectrics Publications

Multiple Cytosolic DNA Sensors Bind Plasmid DNA After Transfection, Nina Semenova, Masa Bosnjak, Katarina Znidar, Maja Cemazar, Loree Heller
Bioelectrics Publications

How Oxygen Availability Affects the Antimicrobial Efficacy of Host Defense Peptides: Lessons Learned from Studying the Copper-Binding Peptides Piscidins 1 and 3, Adenrele Oludiran, David S. Courson, Malia D. Stuart, Anwar R. Radwan, John C. Putsma, Myriam L. Cotten, Erin B. Purcell
Chemistry & Biochemistry Faculty Publications

Acute Systemic Inflammatory Response to Lipopolysaccharide Stimulation in Pigs Divergently Selected for Residual Feed Intake, Haibo Liu, Kristina M. Feye, Yet T. Nguyen, Anoosh Rakhshandeh, Crystal L. Loving, Jack C. M. Sekkers, Nicholas K. Gabler, Christopher K. Tuggle
Mathematics & Statistics Faculty Publications

Endogenous Force Transmission Between Epithelial Cells and a Role for α-Catenin, Sandeep Dumbali
Mechanical & Aerospace Engineering Theses & Dissertations

The Expression Of Connexin-43 By CD11c+ Dendritic Cells Is Required to Maintain CD4+ Foxp3+ Regulatory T Cell Population in Peripheral Lymphoid Organs, Caroline Titus Miller
Biological Sciences Theses & Dissertations

Modulation of Biological Responses to 2 ns Electrical Stimuli by Field Reversal, Esin B. Sözer, P. Thomas Vernier
Bioelectrics Publications

Arthropod Organic Anion Transporting Polypeptides in Tick-Borne Bacterial and Viral Infections, Vikas Kumar Taank
Biomedical Sciences Theses & Dissertations

Study of the Effects of Silver Ions and Silver Nanoparticles on Embryonic Development, Martha Sharisha Johnson
Biomedical Sciences Theses & Dissertations

Aging Study through Fin Regeneration in Zebrafish, Ashley N. Coffell, Andriana C. Zourou, Regan M. Allen, Megan A. Hept, X. Nancy Xu
Undergraduate Research Symposium

Monarchs Maximizing Access to Research Careers: An Undergraduate Student Training Program Funded by the National Institutes of Health, Alvin Holder, Desh Ranjan, Elizabeth A. Smith
Undergraduate Research Symposium

Molecular Strain Typing for the Tick-Borne Pathogen Rickettsia parkeri, Rebecca Ferrara, David Gauthier, Holly Gaff, Wayne Hynes, Sara Simmons
Undergraduate Research Symposium

Separation of Sub-Image Entities in Cryo-Electron Microscopy Density Maps by Clustering, Peter Scheible, Jing He
Undergraduate Research Symposium

Study of Effects of Dopamine on Embryonic Cardiovascular Development in Zebrafish, Andriana C. Zourou, Megan A. Hept, Krishna Raut, X. Nancy Xu
Undergraduate Research Symposium

Dinitrogen Fixation Across Physico-Chemical Gradients of the Eastern Tropical North Pacific Oxygen Deficient Zone, C. R. Selden, M. R. Mulholland, P.W. Bernhardt, B. Widner, A. Macías-Tapia, Q. Ji, A. Jayakumar
OES Faculty Publications

Ebullition of Oxygen From Seagrasses Under Supersaturated Conditions, Matthew H. Long, Kevin Sutherland, Scott D. Wankel, David J. Burdige, Richard C. Zimmerman
OES Faculty Publications

Molecular Level Comparison of Water Extractives of Maple and Oak with Negative and Positive Ion ESI FT-ICR Mass Spectrometry, Zhongqi He, Rachel L. Sleighter, Patrick G. Hatcher, Shasha Liu, Fengchang Wu, Haixuan Zou, O. Modesto Olanya
Chemistry & Biochemistry Faculty Publications

Non-Contact Trapping and Stretching of Biological Cells Using Dual-Beam Optical Stretcher On Microfluidic Platform, Aotuo Dong, Balaadithya Uppalapati, Shariful Islam, Brandon Gibbs, Ganesan Kamatchi, Sacharia Albin, Makarand Deo
Electrical & Computer Engineering Faculty Publications

Condensation and Polymerization Explain the Humification of Lignin Into Aliphatic and Aromatic Structures in Soil, Patrick G. Hatcher, Hongmei Chen, Seyyedhadi Khatami, Derek C. Waggoner
Chemistry & Biochemistry Faculty Publications

pH-Induced Folding of the Caspase-Cleaved Par-4 Tumor Suppressor: Evidence of Structure Outside of the Coiled Coil Domain, Andrea M. Clark, Komala Ponniah, Meghan S. Warden, Emily M. Raitt, Andrea C. Yawn, Stephen M. Pascal
Chemistry & Biochemistry Faculty Publications

Investigation of Electrolytic Flocculation for Microalga Scenedesmus sp Using Aluminum and Graphite Electrodes, Shihong Liu, Husam A. Abu Hajar, Guy Riefler, Ben J. Stuart
Civil & Environmental Engineering Faculty Publications

Lipid Extraction From Spirulina sp. and Schizochytrium sp. Using Supercritical CO2 With Methanol, Shihong Liu, Husam A. Abu Hajar, Guy Riefler, Ben J. Stuart
Civil & Environmental Engineering Faculty Publications

Synthesis and Biological Evaluation of Phaeosphaeride A Derivatives as Antitumor Agents, Victoria Abzianidze, Petr Beltyukov, Sofya Zakharenkova, Natalia Moiseeva, Jennifer Mejia, Alvin Holder, Yuri Trishin, Alexander Berestetskiy, Victor Kuznetsov
Chemistry & Biochemistry Faculty Publications

Accurate Flexible Refinement of Atomic Models Against Medium-Resolution cryo-EM Maps Using Damped Dynamics, Julio A. Kovacs, Vitold E. Galkin, Willy Wriggers
Mechanical & Aerospace Engineering Faculty Publications

Characterizing the Activity of Antimicrobial Peptides Against the Pathogenic Bacterium Clostridium Difficile in an Anaerobic Environment, Adenrele Mojeed Oludiran
Chemistry & Biochemistry Theses & Dissertations

Zika Modulates Arthropod Histone Methylation in Mosquito Cells, Telvin Lee Harrell
Biological Sciences Theses & Dissertations

Advances in Amino Acid Analysis for Marine Related Matrices and Its Application to Coastal Shelf Settings in The Canadian Arctic, Rachel M. McMahon
OES Theses and Dissertations

Characterization and Analysis of Ultrathin CIGS Films and Solar Cells Deposited by 3-Stage Process, Grace Rajan, Krishna Aryal, Shankar Karki, Puruswottam Aryal, Robert W. Collins, Sylvain Marsillac
Electrical & Computer Engineering Faculty Publications

Prediction of lncRNA-Disease Associations Based on Inductive Matrix Completion, Chengqian Lu, Mengyun Yang, Feng Luo, Fang-Xiang Wu, Min Li, Yi Pan, Yaohang Li, Jianxin Wang
Computer Science Faculty Publications

Tracing Actin Filament Bundles in Three-Dimensional Electron Tomography Density Maps of Hair Cell Stereocilia, Salim Sazzed, Junha Song, Julio Kovacs, Willi Wriggers, Manfred Auer, Jing He
Computer Science Faculty Publications

Study of ABC Membrane Transporters in Single Live Cells, Preeyaporn Songkiatisak
Chemistry & Biochemistry Theses & Dissertations

Inactivation of Myeloma Cancer Cells by Helium and Argon Plasma Jets: The Effect Comparison and the Key Reactive Species, Zeyu Chen, Qingjie Cui, Chen Chen, Dehui Xu, Dingxin Liu, H. L. Chen, Michael G. Kong
Bioelectrics Publications

Prevalence of Borrelia spp. in Ixodes ticks in Southeastern Virginia, Zachary Bement, Anna Phan, Wayne Hynes, Holly Gaff
Undergraduate Research Symposium

Cold Atmospheric Plasma as a Potential Tool for Multiple Myeloma Treatment, Dehui Xu, Yujing Xu, Qingjie Cui, Dingxin Liu, Zhijie Liu, Xiaohua Wang, Yanjie Yang, Niaojuan Feng, Rong Liang, Hailan Chen, Kai Ye, Michael G. Kong
Bioelectrics Publications

Dynamic Control of Particle Separation in Deterministic Lateral Displacement Separator with Viscoelastic Fluids, Yuke Li, Hongna Zhang, Yongyao Li, Xiaobin Li, Jian Wu, Shizhi Qian, Fengchen Li
Mechanical & Aerospace Engineering Faculty Publications

Structure of the Picornavirus Replication Platform: A Potential Drug Target for Inhibiting Virus Replication, Meghan Suzanne Warden
Chemistry & Biochemistry Theses & Dissertations

The Biogeochemical Cycling of Iron, Copper, Nickel, Cadmium, Manganese, Cobalt, Lead, and Scandium in a California Current Experimental Study, Travis Mellett, Matthew T. Brown, P. Dreux Chappell, Carolyn Duckham, Jessica N. Fitzsimmons, Claire P. Till, Robert M. Sherrell, Maria T. Maldonado, Kristen N. Buck
OES Faculty Publications

Size-Dependent Inhibitory Effects of Antibiotic Drug Nanocarriers Against Pseudomonas Aeruginosa, Feng Ding, Preeyaporn Songkiatisak, Pavan Kumar Cherukuri, Tao Huang, Xiao-Hong Nancy Xu
Chemistry & Biochemistry Faculty Publications

Coordination of Different Ligands to Copper(II) and Cobalt(III) Metal Centers Enhances Zika Virus and Dengue Virus Loads in Both Arthropod Cells and Human Keratinocytes, Shovan Dutta, Michael J. Celestine, Supreet Khanal, Alexis Huddleston, Colin Simms, Jessa Faye Arca, Amlam Mitra, Loree Heller, Piotr Kraj, Michael Ledizet, John F. Anderson, Girish Neelakanta, Alvin A. Holder, Hameeda Sultana
Biological Sciences Faculty Publications

ESOPE-Equivalent Pulsing Protocols for Calcium Electroporation: An In Vitro Optimization Study on 2 Cancer Cell Models, Stefania Romeo, Anna Sannino, Maria Rosaria Scarfi, P. Thomas Vernier, Ruggero Cadossi, Julie Gehl, Olga Zeni
Bioelectrics Publications

Asymmetric Patterns of Small Molecule Transport After Nanosecond and Microsecond Electropermeabilization, Esin B. Sözer, C. Florencia Pocetti, P. Thomas Vernier
Bioelectrics Publications

Targeting Ovarian Cancer and Endothelium with an Allosteric PTP4A3 Phosphatase Inhibitor, Kelley E. McQueeney, Joseph M. Salamoun, James C. Burnett, Nektarios Barabutis, Paula Pekic, Sophie L. Lewandowski, Danielle C. Llaneza, Robert Cornelison, Yunpeng Bai, Zhong-Yin Zhang, John D. Catravas
Bioelectrics Publications

Wild-Type p53 Enhances Endothelial Barrier Function by Mediating RAC1 Signalling and RhoA Inhibition, Nektarios Barabutis, Christiana Dimitropoulou, Betsy Gregory, John D. Catravas
Bioelectrics Publications

An Investigation of Atomic Structures Derived from X-ray Crystallography and Cryo-Electron Microscopy Using Distal Blocks of Side-Chains, Lin Chen, Jing He, Salim Sazzed, Rayshawn Walker
Computer Science Faculty Publications

Transport of Charged Small Molecules after Electropermeabilization - Drift and Diffusion, Esin B. Sözer, C. Florencia Pocetti, P. Thomas Vernier
Bioelectrics Publications

Dielectric Properties of Isolated Adrenal Chromaffin Cells Determined by Microfluidic Impedance Spectroscopy, A. C. Sabuncu, M. Stacey, G. L. Graviso, N. Semenova, P. T. Vernier, N. Leblanc, I. Chatterjee, J. Zaklit
Bioelectrics Publications

Molecular Geometries and Other Properties of H2O⋯AgI and H3N⋯AgI as Characterised by Rotational Spectroscopy and ab initio Calculations, Chris Medcraft, Eva Gougoula, Dror M. Bittner, John C. Mullaney, Susana Blanco, David P. Tew, Nicholas R. Walker, Anthony C. Legon
Chemistry & Biochemistry Faculty Publications

High-Throughput Single-Molecule Telomere Characterization, Jennifer McCaffrey, Eleanor Young, Katy Lassahn, Justin Sibert, Steven Pastor, Harold Riethman, Ming Xiao
Medical Diagnostics & Translational Sciences Faculty Publications

Human Rickettsial Pathogen Modulates Arthropod Organic Anion Transporting Polypeptide and Tryptophan Pathway for Its Survival in Ticks, Vikas Taank, Shovan Dutta, Amrita Dasgupta, Durland Fish, John F. Anderson, Hameeda Sultana, Girish Neelakanta
Biological Sciences Faculty Publications

Effects of Carboxylated Nanodiamonds on Macrophages During and After Differentiation, Maisoun E. Bani Hani
Biological Sciences Theses & Dissertations

Marine Reserves Promote Coral Reef Resilience by Mitigating Human Impacts Through the Restoration of Parrotfish Populations, Increasing Their Reproductive Output and Seeding Neighboring Overfished Reefs, Brian L. Stockwell
Biological Sciences Theses & Dissertations

Activation of the Phospholipid Scramblase TMEM16F by Nanosecond Pulsed Electric Field (nsPEF) Facilitates Its Diverse Cytophysiological Effects, Claudia Muratori, Andrei G. Pakhomov, Elena Gianulis, Jade Meads, Maura Casciola, Peter A. Mollica, Olga N. Pakhomova
Bioelectrics Publications

Microstructure of Attachment Mechanisms of Newly Hatched Larvae of Four Cyprinid Species with Comments on Terminology, George E. Maurakis, Eugene G. Maurakis
Virginia Journal of Science

Perspective: The Physics, Diagnostics, and Applications of Atmospheric Pressure Low Temperature Plasma Sources Used in Plasma Medicine, M. Laroussi
Electrical & Computer Engineering Faculty Publications

The Chondrocyte Channelome: A Novel Ion Channel Candidate in the Pathogenesis of Pectus Deformities, Anthony J. Asmar
Biological Sciences Theses & Dissertations

A Balanced Approach to Adaptive Probability Density Estimation, Julio Kovacs, Cailee Helmick, Willy Wriggers
Mechanical & Aerospace Engineering Faculty Publications

Computing Spatiotemporal Heat Maps of Lipid Electropore Formation: A Statistical Approach, Willy Wriggers, Frederica Castellani, Julio A. Kovacs, P. Thomas Vernier
Mechanical & Aerospace Engineering Faculty Publications

Quantifying Cyanide Inhibition of Nitrification and Developing Cost-Effective Treatment Processes, Germano M. Salazar-Benites
Civil & Environmental Engineering Theses & Dissertations

Testing Effectiveness of Aqueous Phases from Struvite and Hydroxyapatite Mineral Precipitation as Algal Nutrient Sources, Aaron Lyons
Virginias Collegiate Honors Council Conference

Mass Balance of Scenedesmus sp. Flash Hydrolysis Extraction Process, Kimberly Bethea
Virginias Collegiate Honors Council Conference

Promoting Scenedemus sp. Survival Against Zooplankton with Unionized Ammonia, Laurence Egall
Virginias Collegiate Honors Council Conference

Computational Detection of Protein Structure Components from 3-Dimensional Images Obtained from Cryo-Electron Microscopy, Devin Haslam
Virginias Collegiate Honors Council Conference

Patterns of Activation and Repression for a Single Transcription Factor with Multiple Binding Sites, Sieu Tran
Virginias Collegiate Honors Council Conference

Like a Gecko: Usefulness of Organic Light Responsive Materials, Ashleigh Rawls
Virginias Collegiate Honors Council Conference

Ticks Elicit Variable Fibrinogenolytic Activities Upon Feeding on Hosts With Different Immune Backgrounds, Ashish Vora, Vikas Taank, John F. Anderson, Durland Fish, Daniel E. Sonenshine, John D. Catravas, Hameeda Sultana, Girish Neelakanta
Biological Sciences Faculty Publications

Characterization and Analysis of Real-Time Capillary Convective PCR Toward Commercialization, Xianbo Qiu, Shiyin Zhang, Lanju Mei, Di Wu, Ke Li, Shengxiang Ge, Xiangzhong Ye, Ningshao Xia, Michael G. Mauk
Mechanical & Aerospace Engineering Faculty Publications

Quantitative Limits on Small Molecule Transport via the Electropermeome - Measuring and Modeling Single Nanosecond Perturbations, Esin B. Sözer, Zachary A. Levine, P. Thomas Vernier
Bioelectrics Publications

Biophysical Tools to Study Cellular Mechanotransduction, Ismeel Muhamed, Farhan Chowdhury, Venkat Maruthamuthu
Mechanical & Aerospace Engineering Faculty Publications

Comparing an Atomic Model or Structure to a Corresponding Cryo-Electron Microscopy Image at the Central Axis of a Helix, Stephanie Zeil, Julio Kovacs, Willy Wriggers, Jing He
Computer Science Faculty Publications

Biochemical and Histological Differences Between Costal and Articular Cartilages, Michael W. Stacey
Bioelectrics Publications

Exosomes Serve as Novel Modes of Tick-Borne Flavivirus Transmission From Arthropod to Human Cells and Facilitates Dissemination of Viral RNA and Proteins to the Vertebrate Neuronal Cells, Wenshuo Zhou, Michael Woodson, Biswas Neupane, Fengwei Bai, Michael B. Sherman, Kyung H. Choi, Girish Neelakanta, Hameeda Sultana
Biological Sciences Faculty Publications

Beyond Zar: The Use and Abuse of Classification Statistics for Otolith Chemistry, C. M. Jones, M. Palmers, J. J. Schaffler
OES Faculty Publications

Frontiers in Otolith Chemistry: Insights, Advances and Applications, B. D. Walther, K. E. Limburg, C. M. Jones, J. J. Schaffler
OES Faculty Publications

MetaGOmics: A Web-Based Tool for Peptide-Centric Functional and Taxonomic Analysis of Metaproteomics Data, Michael Riffle, Damon H. May, Emma Timmins-Schiffman, Molly P. Mikan, Daniel Jaschob, William S. Noble, Brook L. Nunn
OES Faculty Publications

Enhancement of the Physicochemical Properties of Pt(dien)(nucleobase) (2+) for HIVNCp7 Targeting, S. D. Tsotsoros, P. B. Lutz, A. G. Daniel, E. J. Peterson, R. E. F. De Paiva, E. Rivera, Y. Qu, C. A. Bayse, N. P. Farrell
Chemistry & Biochemistry Faculty Publications

An Effective Computational Method Incorporating Multiple Secondary Structure Predictions in Topology Determination for Cryo-EM Images, Abhishek Biswas, Desh Ranjan, Mohammad Zubair, Stephanie Zeil, Kamal Al Nasr, Jing He
Computer Science Faculty Publications

Hyper-Activation of pp60(Src) Limits Nitric Oxide Signaling by Increasing Asymmetric Dimethylarginine Levels During Acute Lung Injury, Sanjiv Kumar, Xutong Sun, Satish Kumar Noonepalle, Qing Lu, Evgeny Zemskov, Ting Wang, Saurabh Aggarwal, Christine Gross, Shruti Sharma, Ankit A. Sesai, John D. Catravas
Bioelectrics Publications

Synthesis and Characterization of Amide Linked Triazolyl Glycolipids as Molecular Hydrogelators and Organogelators, Guijun Wang, Anji Chen, Hari P. R. Mangunuru, Jayasudhan Reddy Yerabolu
Chemistry & Biochemistry Faculty Publications

Tissue Specific Microenvironments: A Key Tool for Tissue Engineering and Regenerative Medicine, Patrick C. Sachs, Peter A. Mollica, Robert D. Bruno
Medical Diagnostics & Translational Sciences Faculty Publications

High-Throughput Single-Molecule Mapping Links Subtelomeric Variants and Long-Range Haplotypes with Specific Telomeres, Eleanor Young, Steven Pastor, Ramakrishnan Rajagopalan, Jennifer McCaffrey, Justin Sibert, Angel C. Y. Mak, Pui-Yan Kwok, Harold Riethman, Ming Xiao
Medical Diagnostics & Translational Sciences Faculty Publications

Bioenergetics: Experimental Demonstration of Excess Protons and Related Features, Haitham A. Saeed
Chemistry & Biochemistry Theses & Dissertations

Design of Drug Nano-Carriers for Study of Multidrug Resistance in Single Live Cells, Pavan Kumar Cherukuri
Chemistry & Biochemistry Theses & Dissertations

Vascular Endothelial Growth Factor-A Gene Electrotransfer Promotes Angiogenesis in a Porcine Model of Cardiac Ischemia, Anna A. Bulysheva, Barbara Hargrave, Nina Burcus, Cathryn G. Lundberg, Len Murray, Richard Heller
Bioelectrics Publications

A 'Tissue Model' to Study the Barrier Effects of Living Tissues on the Reactive Species Generated by Surface Air Discharge, Tongtong He, Dingxin Liu, Han Xu, Zhichao Liu, Dehui Xu, Dong Li, Qiosong Li, Mingzhe Rong, Michael G. Kong
Bioelectrics Publications

Synthesis and Mechanistic Investigations of Transition Metal Complexes and Ligands for Chemotherapeutic Applications, Jimmie Lee Bullock Jr.
Chemistry & Biochemistry Theses & Dissertations

Section Abstracts: Structural Biology, Biochemistry, and Biophysics,
Virginia Journal of Science

Deep Models for Brain EM Image Segmentation: Novel Insights and improved Performance, Ahmed Fakhry, Hanchuan Peng, Shuiwang Ji
Computer Science Faculty Publications

Conserved Intramolecular Interactions Maintain Myosin Interacting-Heads Motifs Explaining Tarantula Muscle Super-Relaxed State Structural Basis, Lorenzo Alamo, Dan Qi, Willy Wriggers, Antonio Pinto, Jingui Zhu, Aivett Bilbao, Richard E. Gillilan, Songnian Hu, Raúl Padrón
Mechanical & Aerospace Engineering Faculty Publications

Mitochondrial Function Assessed by 31P MRS and BOLD MRI in Non-Obese Type 2 Diabetic Rats, Yuchi Liu, Xunbai Mei, Jielei Li, Nicola Lai, Xin Yu
Electrical & Computer Engineering Faculty Publications

A Dielectric Rod Antenna for Picosecond Pulse Stimulation of Neurological Tissue, Ross A. Petrella, Karl H. Schoenbach, Shu Xiao
Bioelectrics Publications

Effects of High Voltage Nanosecond Electric Pulses on Eukaryotic Cells (in vitro): A Systematic Review, Tina Batista Napotink, Matej Reberšek, P. Thomas Vernier, Babara Mali, Damijan Miklavčič
Bioelectrics Publications

DNA Repair Deficiency in Huntington's Disease Fibroblasts and Induced Pluripotent Stem Cells, Peter Anthony Mollica
Biological Sciences Theses & Dissertations

ISQuest: Finding Insertion Sequences in Prokaryotic Sequence Fragment Data, Abhishek Biswas, David T. Gauthier, Desh Ranjan, Mohammad Zubair
Computer Science Faculty Publications

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Section Abstracts: Structural Biology, Biochemistry, and Biophysics,
Virginia Journal of Science

Exploring the Effect of Climate Change on Biological Systems, Nardos Sori
Chemistry & Biochemistry Theses & Dissertations

IMBER- Research for Marine Sustainability: Synthesis and the Way Forward, Eileen Hofmann, Alida Bundy, Ken Drinkwater, Alberto R. Piola, Bernard Avril, Carol Robinson
CCPO Publications

Diffuse, Non-Polar Electropermeabilization and Reduced Propidium Uptake Distinguish the Effect of Nanosecond Electric Pulses, Iurii Semenov, Christian W. Zemlin, Olga N. Pakhomova, Shu Xiao, Andrei G. Pakhomov
Bioelectrics Publications

Picosecond to Terahertz Perturbation of Interfacial Water and Electropermeabilization of Biological Membranes, P. Thomas Vernier, Zachary A. Levine, Ming-Chak Ho, Shu Xiao, Iurii Semenov, Andrei G. Pakhomov
Bioelectrics Publications

Viscoelastic effects on electrokinetic particle focusing in a constricted microchannel, Xinyu Lu, John DuBose, Sang Woo Joo, Shizhi Qian, Xiangchun Xuan
Mechanical & Aerospace Engineering Faculty Publications

Numerical Geometry of Map and Model Assessment, Willy Wriggers, Jing He
Mechanical & Aerospace Engineering Faculty Publications

Altered Connexin 43 Expression Underlies Age-Dependent Decrease of Regulatory T Cell Suppressor Function in Nonobese Diabetic Mice, Michel Kuczma, Cong-Yi Wang, Leszek Ignatowicz, Robert Gourdi, Piotr Kraj
Biological Sciences Faculty Publications

The Relative Importance of Methanogenesis in the Decomposition of Organic Matter in Northern Peatlands, J. Elizabeth Corbett, Malak M. Tfaily, David J. Burdige, Paul H. Glaser, Jeffrey P. Chanton
OES Faculty Publications

Divergent Responses of Atlantic Coastal and Oceanic Synechococcus to Iron Limitation, Katherine R. M. Mackey, Anton F. Post, Matthew R. McIlvin, Gregory A. Cutter, Seth G. John, Mak A. Saito
OES Faculty Publications

Genetic Indicators of Iron Limitation in Wild Populations of Thalassiosira oceanica From the Northeast Pacific Ocean, P. Dreux Chappell, LeAnn P. Whitney, Joselynn R. Wallace, Adam I. Darer, Samua Jean-Charles, Bethany D. Jenkins
OES Faculty Publications

The GEOTRACES Intermediate Data Product 2014, Edward Mawji, Reiner Schlitzer, Elena M. Dodas, Cyril Abadie, Wafa Abouchami, Robert F. Anderson, Gregory A. Cutter
OES Faculty Publications

Liver Perilipin 5 Expression Worsens Hepatosteatosis But Not Insulin Resistance in High Fat-Fed Mice, Michelle B. Trevino, David Mazur-Hart, Yui Machida, Timothy King, Joseph Nadler, Elena V. Galkina, Arjun Poddar, Sucharita Dutta, Yumi Imai
Mathematics & Statistics Faculty Publications

Gadolinium Modifies the Cell Membrane to Inhibit Permeabilization by Nanosecond Electric Pulses, Elena C. Gianulis, Andrei G. Pakhomov
Bioelectrics Publications

Introduction to Fifth Special Issue on Electroporation-Based Technologies and Treatments, Damijan Miklavčič, Lluis M. Mir, P. Thomas Vernier
Bioelectrics Publications

In Situ OH Generation From O2- and H2O2 Plays a Critical Role in Plasma Induced Cell Death, Dehui Xu, Dingxing Liu, Biqing Wang, Chen Chen, Zeyu Chen, Dong Li, Yanjie Yang, Hailan Chen, Michael G. Kong
Bioelectrics Publications

Electroporation of Mammalian Cells by Nanosecond Electric Field Oscillations and it's Inhibition by the Electric Field Reversal, Elena C. Gianulis, Jimo Lee, Chunqi Jiang, Shu Xiao, Bennet L. Ibey, Andrei G. Pakhomov
Bioelectrics Publications

Density Functional Theory Modeling of It-Stacking and Electrophilic Donor-Acceptor Interactions with Application to Therapeutic Targeting of Zinc-Finger Proteins, Patricia Beall Lutz
Chemistry & Biochemistry Theses & Dissertations

Experimental and Computational Analysis of the Synucleins, Agatha Munyanyi
Theses and Dissertations in Biomedical Sciences

Redox Active Motifs in Selenoproteins, Fei Li, Yuliya Pepelyayeva, Elias S. J. Arner, Craig A. Bayse, Sharon Rozovsky
Chemistry & Biochemistry Faculty Publications

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Comparison of Two Separation Methods for Biological Particles: Field-Flow Fractionation (FFF) and Sucrose Density Gradients, Cody E. Garrison
OES Theses and Dissertations

Section Abstracts: Structural Biology, Biochemistry, and Biophysics,
Virginia Journal of Science

Tracing Beta Strands Using StrandTwister from Cryo-EM Density Maps at Medium Resolutions, Dong Si, Jing He
Computer Science Faculty Publications

Automated Identification of Cell Type Specific Genes in the Mouse Brain by Image Computing of Expression Patterns, Rongjian Li, Wenlu Zhang, Shuiwang Ji
Computer Science Faculty Publications

Evaluations of a Mechanistic Hypothesis for the Influence of Extracellular Ions on Electroporation Due to High-Intensity, Nanosecond Pulsing, V. Sridhara, R. P. Joshi
Electrical & Computer Engineering Faculty Publications

Numerical Study of Lipid Translocation Driven by Nanoporation Due to Multiple High-Intensity, Ultrashort Electrical Pulses, Viswanadham Sridhara, Ravindra P. Joshi
Electrical & Computer Engineering Faculty Publications

Cellular Regulation of Extension and Retraction of Pseudopod-Like Blebs Produced by Nanosecond Pulsed Electric Field, Mikhail A. Rassokhin, Andrei G. Pakhomov
Bioelectrics Publications

An Unexpected Particle Oscillation for Electrophoresis in Viscoelastic Fluids Through a Microchannel Constriction, Xinyu Lu, Saurin Patel, Meng Zhang, Sang Woo Joo, Shizhi Qian, Amod Ogale, Xiangchun Xuan
Mechanical & Aerospace Engineering Faculty Publications

Microfluidic Electrical Sorting of Particles Based on Shape in a Spiral Microchannel, John DuBose, Xinyu Lu, Saurin Patel, Shizhi Qian, Sang Woo Joo
Mechanical & Aerospace Engineering Faculty Publications

Lineage-Specific Transcriptional Profiles of Symbiodinium spp. Unaltered by Heat Stress in a Coral Host, Daniel J. Barshis, Jason T. Ladner, Thomas A. Oliver, Stephen R. Palumbi
Biological Sciences Faculty Publications

Design and Study of the Efflux Function of the EGFP Fused MexAB-OprM Membrane Transporter in Pseudomonas aeruginosa Using Spectroscopy, Feng Ding, Kerry J. Lee, Ardeschir Vahedi-Faridi, Hiroshi Yoneyama, Christopher J. Osgood, Xiao-Hong Nancy Xu
Biological Sciences Faculty Publications

Calcium-Mediated Pore Expansion and Cell Death Following Nanoelectroporation, Olga N. Pakhomova, Betsy Gregory, Iurii Semenov, Andrei G. Pakhomov
Bioelectrics Publications

Introduction to Fourth Special Issue on Electroporation-Based Technologies and Treatments, Damijan Miklavčič, Lluis M. Mir, P. Thomas Vernier
Bioelectrics Publications

Cancellation of Cellular Responses to Nanoelectroporation by Reversing the Stimulus Polarity, Andrei G. Pakhomov, Iurii Semenov, Shu Xiao, Olga N. Pakhomova, Betsy Gregory, Karl H. Schoenbach
Bioelectrics Publications

Bipolar Nanosecond Electric Pulses are Less Efficient at Electropermeabilization and Killing Cells than Monopolar Pulses, Bennett L. Ibey, Olga N. Pakhomova, Caleb C. Roth, Shu Xiao, Karl Schoenbach, Andrei G. Pakhomov
Bioelectrics Publications

Dielectric Characterization of Coastal Cartilage Chondrocytes, Michael W. Stacey, Ahmet C. Sabuncu, Ali Beskok
Bioelectrics Publications

Template-Based C8-Scorpion: A Protein 8 State Secondary Structure Prediction Method Using Structural Information and Context-Based Features, Ashraf Yaseen, Yaohang Li
Computer Science Faculty Publications

Disassembly of Actin Structures by Nanosecond Pulsed Electric Field is a Downstream Effect of Cell Swelling, Andrei G. Pakhomov, Shu Xiao, Olga N. Pakhomova, Iurii Semenov, Marjorie A. Kuipers, Bennett L. Ibey
Bioelectrics Publications

Basic Features of a Cell Electroporation Model: Illustrative Behavior for Two Very Different Pulses, Reuben S. Son, Kyle C. Smith, Thiruvallur R. Gowrishankar, P. Thomas Vernier, James C. Weaver
Bioelectrics Publications

Leptin Regulates CD16 Expression on Human Monocytes in a Sex-Specific Manner, Joseph G. Cannon, Gyanendra Sharma, Gloria Sloan, Christiana Dimitropoulou, R. Randall Baker, Andrew Mazzoli, Barbara Kraj, Anthony Mulloy, Miriam Cortez-Cooper
Medical Diagnostics & Translational Sciences Faculty Publications

Dimethylarginine Dimethylaminohydrolase II Overexpression Attenuates LPS-Mediated Lung Leak in Acute Lung Injury, Saurabh Aggarwal, Christine M. Gross, Sanjiv Kumar, Christiana Dimitropoulou, Shruti Sharma, Boris A. Gorshkov, Supriya Sridhar, Qing Lu, Natalia V. Bogatcheva, Agnieszka J. Jezierska-Drutel, Rudolf Lucas, John D. Catravas, Stephen M. Black
Bioelectrics Publications

New Types of Morpho-Physiological Changes in Cells Exposed to Nanosecond Pulsed Electric Field, Mikhail A. Rassokhin
Theses and Dissertations in Biomedical Sciences

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Section Abstracts: Structural Biology, Biochemistry and Biophysics,
Virginia Journal of Science

Intensity-Based Skeletonization of CryoEM Gray-Scale Images Using a True Segmentation-Free Algorithm, Kamal Al Nasr, Chunmei Liu, Mugizi Rwebangira, Legand Burge, Jing He
Computer Science Faculty Publications

Conformational Sampling in Template Free Protein Loop Structure Modeling: An Overview, Yaohang Li
Computer Science Faculty Publications

Computational Genetic Neuroanatomy of the Developing Mouse Brain: Dimensionality Reduction, Visualization, and Clustering, Shuiwang Ji
Computer Science Faculty Publications

Molecular Dynamics Simulations of Ion Conductance in Field-Stabilized Nanoscale Lipid Electropores, Ming-Chak Ho, Maura Casciola, Zachary A. Levine, P. Thomas Vernier
Bioelectrics Publications

Primary Pathways of Intracellular Ca2+ Mobilization by Nanosecond Pulsed Electric Field, Iurii Semenov, Shu Xiao, Andrei G. Pakhomov
Bioelectrics Publications

Recruitment of the Intracellular Ca2+ By Ultrashort Electric Stimuli: The Impact of Pulse Duration, Iurii Semenov, Shu Xiao, Olga N. Pakhomova, Andrei G. Pakhomov
Bioelectrics Publications

Intercalibraton in Chemical Oceanography-- Getting The Right Number, Gregory A. Cutter
OES Faculty Publications

Attachment Ability and Melanoma Inhibitory Activity mRNA Expression Level Changes in Murine B16-F10 Melanoma Cells Post Nanosecond Electric Pulses, Hongxia Jia
Theses and Dissertations in Biomedical Sciences

Structural and Functional Study of Multidrug Membrane Transporters, Feng Ding
Theses and Dissertations in Biomedical Sciences

New Tools for Real-Time Study of Embryonic Development, Lauren M. Browning
Theses and Dissertations in Biomedical Sciences

Using Ammonium Pore Water Profiles to Assess Stoichiometry of Deep Remineralization Processes in Methanogenic Continental Margin Sediments, David J. Burdige, Tomoko Komada
OES Faculty Publications

Distributions of Particulate Heme b in the Atlantic and Southern Oceans- Implications for Electron Transport in Phytoplankton, Martha Gledhill, Eric P. Achterberg, David J. Honey, Maria C. Nielsdottir, Micha J.A. Rijkenberg
OES Faculty Publications

The Role of p38 MAPK in the Aetiopathogenesis of Psoriasis and Psoriatic Arthritis, Athanasios Mavropoulos, Eirini I. Rigopoulou, Christos Liaskos, Dimitrios P. Bogdanos, Lazaros I. Sakkas
Biological Sciences Faculty Publications

Real-Time in vivo Imaging of Size-Dependent Transport and Toxicity of Gold Nanoparticles in Zebrafish Embryos Using Single Nanoparticle Plasmonic Spectroscopy, Lauren M. Browning, Tao Huang, Xiao-Hong Nancy Xu
Chemistry & Biochemistry Faculty Publications

The Relative Contribution of Methanotrophs to Microbial Communities and Carbon Cycling in Soil Overlying a Coal-Bed Methane Seep, Christopher T. Mills, Gregpry F. Slater, Robert F. Dias, Stephanie A. Carr, Christopher M. Reddy, Raleigh Schmidt, Kevin W. Mandernack
Chemistry & Biochemistry Faculty Publications

Estimating Loop Length from CryoEM Images at Medium Resolutions, Andrew McKnight, Dong Si, Kamal Al Nasr, Andrey Chemikov, Nikos Chrisochoides, Jing He
Computer Science Faculty Publications

Biochalcogen Chemistry: The Biological Chemistry of Sulfur, Selenium, and Tellurium, Craig A. Bayse (Editor), Julia L. Brumaghim
Chemistry & Biochemistry Faculty Books

Response to "Sodium Current Inhibition by Nanosecond Pulsed Electric Field (nsPEF) - Fact or Artifact?" by Verkerk et al, Andrei G. Pakhomov
Bioelectrics Publications

Electroporation-Mediated Gene Transfer Directly to the Swine Heart, Barbara Hargrave, Harre Downey, Cathryn Lundberg, Annelise Israel, Yeong-Jer Chen, Richard Heller
Bioelectrics Publications

Design of In Vivo Assays for Study of Transport, Biocompatibility and Toxicity of Nanoparticles, Kerry Jean Lee
Theses and Dissertations in Biomedical Sciences

Nano- and Micro-Second Electrical Pulsing of B16-F10 Mouse Melanoma Cells: Plasma Membrane and Sub-Cellular Organelle Changes, Yiling Chen
Theses and Dissertations in Biomedical Sciences

The Dietary Isoprenoid Perillyl Alcohol Inhibits Telomerase Activity in Prostate Cancer Cells, Tabetha Sundin
Theses and Dissertations in Biomedical Sciences

Section Abstracts: Structural Biology, Biochemisty, and Biophysics,
Virginia Journal of Science

Nonosecond Pulsed Electric Field Induced Changes in Dielectric Properties of Biological Cells, Jie Zhuang
Electrical & Computer Engineering Theses & Dissertations

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Inhibition of Voltage-Gated Na+ Current by Nanosecond Pulsed Electric Field (nsPEF) is Not Mediated by NA+ Influx or Ca²+ Signaling, Vasyl Nesin, Andrei G. Pakhomov
Bioelectrics Publications

Microfluidic Impedance Spectroscopy as a Tool for Quantitative Biology and Biotechnology, Ahmet C. Sabuncu, Jie Zhuang, Juergen F. Kolb, Ali Beskok
Mechanical & Aerospace Engineering Faculty Publications

Expansion Dating: Calibrating Molecular Clocks in Marine Species from Expansions onto the Sunda Shelf Following the Last Glacial Maximum, Eric D. Crandall, Elizabeth J. Sbrocco, Timery S. DeBoer, Paul H. Barber, Kent E. Carpenter
Biological Sciences Faculty Publications

Molecular Characterization and Tissue-Specific Gene Expression of Dermacentor variabilis α-catenin in Response to Rickettsial Infection, Piyanate Sunyakumthorn, Natthida Petchampai, Michael T. Kearney, Daniel E. Sonenshine, Kevin R. Macaluso
Biological Sciences Faculty Publications

Oxidative Effects of Nanosecond Pulsed Electric Field Exposure in Cells and Cell-Free Media, Olga N. Pakhomova, Vera A. Khorokhorina, Angela M. Bowman, Raminta Rodaitė-Riševičienė, Gintautas Saulis, Shu Xiao, Andrei G. Pakhomov
Bioelectrics Publications

Controls on Dissolved Cobalt in Surface Waters of the Sargasso Sea: Comparisons with Iron and Aluminum, R. U. Shelley, Peter N. Sedwick, T. S. Bibby, P. Cabedo-Sanz, T. M. Church, R. J. Johnson, A. I. Macey, C. M. Marsay, E. R. Sholkovitz, S. J. Ussher, P. J. Worsfold, M. C. Lohan
OES Faculty Publications

Rapid and Noncontaminating Sampling System For Trace Elements in Global Ocean Surveys, Gregory A. Cutter, Kenneth W. Bruland
OES Faculty Publications

Protein Folding by 'Levels of Separation': A Hypothesis, Lesley H. Greene, Terri M. Grant
Chemistry & Biochemistry Faculty Publications

Signals from Intraventricular Depth Electrodes Can Control a Brain-Computer Interface, Jerry J. Shih, Dean J. Krusienski
Electrical & Computer Engineering Faculty Publications

Electric Field Exposure Triggers and Guides Formation of Pseudopod-Like Blebs in U937 Monocytes, Mikhail A. Rassokhin, Andrei G. Pakhomov
Bioelectrics Publications

Cell Permeabilization and Inhibition of Voltage-Gated Ca²+ and Na+ Channel Currents by Nanosecond Pulsed Electric Fields, Vasyl Nesin, Angela M. Bowman, Shu Xiao, Andrei G. Pakhomov
Bioelectrics Publications

Microfluidic Separation of Live and Dead Yeast Cells Using Reservoir-Based Dielectrophoresis, Saurin Patel, daniel Showers, Pallavi Vedantam, Tzuen-Rong Tzeng, Shizhi Qian, Xiangchun Xuan
Mechanical & Aerospace Engineering Faculty Publications

Protein Structure Networks, Lesley H. Greene
Chemistry & Biochemistry Faculty Publications

Altering Nitric Oxide Bioavailability and Lipid Profiles in Endothelial Cells By Polycyclic Aromatic Hydrocarbons in Particulate Matter, Liang Yu
Theses and Dissertations in Biomedical Sciences

Nanosecond Pulsed Electric Field Induction of Programmed Cell Death Is Cell Type Dependent: An in vitro Study, Wei Ren
Theses and Dissertations in Biomedical Sciences

Evaluation of Delivery Conditions for Cutaneous Plasmid Electrotransfer Using a Multielectrode Array, Bernadette Ferraro, Loree C. Heller, Yolmari L. Cruz, Siqi Guo, Amy Donate, Richard Heller
Bioelectrics Publications

Bioinformatics, Thermodynamics and Kinetics Analysis of an All Alpha Helical Protein with a Gree-Key Topology, Hai Li
Chemistry & Biochemistry Theses & Dissertations

Computational Investigation of the Bioactive Selenium Compounds Ebselen and Selenious Acid, Sonia Antony
Chemistry & Biochemistry Theses & Dissertations

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Section Abstracts: Structural Biology, Biochemistry, and Biophysics,
Virginia Journal of Science

A Microfluidic Device for Impedance Spectroscopy, Ahmet Can Sabuncu
Mechanical & Aerospace Engineering Theses & Dissertations

An Apoptosis Targeted Stimulus with Nanosecond Pulsed Electric Fields (nsPEFs) in E4 squamous Cell Carcinoma, Wei Ren, Stephen J. Beebe
Bioelectrics Publications

A Cell Electrofusion Microfluidic Device Integrated with 3D Thin-Film Microelectrode Arrays, Ning Hu, Jun Yang, Shizhi Qian, Sang W. Joo, Xiaolin Zheng
Mechanical & Aerospace Engineering Faculty Publications

Computational Network Analysis of the Anatomical and Genetic Organizations in the Mouse Brain, Shuiwang Ji
Computer Science Faculty Publications

Targeted Identification of Metastasis-Associated Cell-Surface Sialoglycoproteins in Prostate Cancer, Lifang Yang, Julius O. Nyalwidhe, Sigi Guo, Richard R. Drake, O. John Semmes
Bioelectrics Publications

3,4-Methylenedioxymethamphetamine Alters Left Ventricular Function and Activates Nuclear Factor-Kappa B (NF-kappaB) in a Time and Dose Dependent Manner, David A. Tiangco, Sapna Halcomb, Frank A. Lattanzio Jr, Barbara Y. Hargrave
Bioelectrics Publications

Characterization of Metastasis-Associated Cell Surface Glycoproteins in Prostate Cancer, Lifang Yang
Theses and Dissertations in Biomedical Sciences

Negative Dielectrophoretic Capture of Bacterial Spores in Food Matrices, Mehti Koklu, Seungkyung Park, Suresh D. Pillai, Ali Beskok
Mechanical & Aerospace Engineering Faculty Publications

Experimental Investigation of a Non-Thermal Atmospheric Pressure Plasma Jet, Asma Begum
Electrical & Computer Engineering Theses & Dissertations

The Effects of Cocaine and Ecstasy on Cardiac Myocytes and the Intact Myocardium, David A. Tiangco
Theses and Dissertations in Biomedical Sciences

Conformational Change and Topological Stability of Proteins, Jeffrey Andrew Tibbitt
Chemistry & Biochemistry Theses & Dissertations

Section Abstracts: Structural Biology, Biochemistry, and Biophysics,
Virginia Journal of Science

Section Abstracts: Biology with Microbiology and Molecular Biology,
Virginia Journal of Science

Crystallization of Community-Acquired Respiratory Distress Syndrome Toxin from Mycoplasma Pneumonia, Olga N. Pakhomova, Alexander B. Taylor, Argentina Becker, Stephen P. Holloway, T. R. Kannan, Joel B. Baseman, P. John Hart
Bioelectrics Publications

Frustrated Drift of an Anchored Scroll-Wave Filament and the Geodesic Principle, Marcel Wellner, Christian W. Zemlin, Arkady M. Pertsov
Bioelectrics Publications

Dielectrophoretic Choking Phenomenon in a Converging-Diverging Microchannel, Ye Ai, Shizhi Qian, Sheng Liu, Sang W. Joo
Mechanical & Aerospace Engineering Faculty Publications

Chloroquine Susceptibility and Reversibility in a Plasmodium Falciparum Genetic Cross, Jigar J. Patel, Drew Thacker, John C. Tan, Perri Pleeter, Lisa Checkley, Joseph M. Gonzales, Bingbing Deng, Paul D. Roepe, Roland A. Cooper, Michael T. Ferdig
Biological Sciences Faculty Publications

Improving Predicted Protein Loop Structure Ranking Using a Pareto-Optimality Consensus Method, Yaohang Li, Ionel Rata, See-Wing Chiu, Erik Jakobsson
Computer Science Faculty Publications

The 3rd Computational Structural Bioinformatics Workshop, Jing He, Di Wu
Computer Science Faculty Publications

Increased Perfusion and Angiogenesis in a Hindlimb Ischemia Model with Plasmid FGF-2 Delivered by Noninvasive Electroporation, B. Ferraro, Y. L. Cruz, M. Baldwin, D. Coppola, R. Heller
Bioelectrics Publications

Electroporation-Mediated Delivery of a Naked DNA Plasmid Expressing VEGF to the Porcine Heart Enhances Protein Expression, W. G. Marshall Jr., B. A. Boone, J. D. Burgos, S. I. Gografe, M. K. Baldwin, M. L. Danielson, M. J. Larson, D. R. Caretto, Y. Cruz, B. Ferraro, L. C. Heller, K. E. Ugen, M. J. Jaroszeski, R. Heller
Bioelectrics Publications

Electric Pulses to Prepare Feeder Cells for Sustaining and Culturing of Undifferentiated Embryonic Stem Cells, Lauren M. Browning, Tao Huang, Xiao-Hong Nancy Xu
Chemistry & Biochemistry Faculty Publications

Theoretical Studies of 2,3 -Sigmatropic Rearrangements of Allylic Selenoxides and Selenimides, Craig A. Bayse, Sonia Antony
Chemistry & Biochemistry Faculty Publications

Lipid Targets of the Antimalarial Trioxanes in Plasmodium falciparum, Carmony Leah Hartwig
Biological Sciences Theses & Dissertations

Section Abstracts: Biology and Microbiology & Molecular Biology,
Virginia Journal of Science

Role of the Human Cytomegalovirus IE2 Protein on Transcriptional Regulation of Viral Promoters, Siabhon Michelle Harris
Theses and Dissertations in Biomedical Sciences

Phosphorylation of the Estrogen Receptor Alpha (ERα) at Serine 118 by Phospho-p44/42 MAPK and Regulation by Estrogen and Progesterone in Human Uterine Leiomyoma Tissue and Cells, Tonia Lakisha Hermon
Theses and Dissertations in Biomedical Sciences

Study of the DNA Damage Complexes Within the HTLV-1 Tax Oncoprotein Interactome, Sidi Mehdi Belgnaoui
Theses and Dissertations in Biomedical Sciences

Comparison of Immune Correlates, Age Related Changes and Proteomic Profiling of Healthy Individuals Receiving Influenza Vaccines, Gaurav Basu
Theses and Dissertations in Biomedical Sciences

Interdependent Regulation of Cytomegalovirus Proteins in Complex, Lisa L. Bolin
Theses and Dissertations in Biomedical Sciences

Characterization of Antibiotic Resistance in Vibrio cholerae Isolated From Ships' Ballast and Other Environmental Sources, Frank Kornegay Thomson III
OES Theses and Dissertations

Pressure-Driven Transport of Particles Through a Converging-Diverging Microchannel, Ye Ai, Sang W. Joo, Xiangchun Xuan, Shizhi Qian
Mechanical & Aerospace Engineering Faculty Publications

Comparative Efficacy of BioUD to Other Commercially Available Arthropod Repellants Against the Ticks Amblyomma americanum and Dermacentor variabilis on Cotton Cloth, Brooke W. Bissinger, Jiwei Zhu, Charles S. Apperson, Daniel E. Sonenshine, D. Wesley Watson, R. Michael Roe
Biological Sciences Faculty Publications

Analysis of N-Linked Oligosaccharides of Prostate-Specific Antigen and Prostatic Acid Phosphatase in Prostatic Fluids, Krista Yaudes White
Theses and Dissertations in Biomedical Sciences

Molecular Dynamics Study of Single Stranded Peptide Nucleic Acids, Anna K. Manukyan
Theses and Dissertations in Biomedical Sciences

Computational Studies on R67 Dihydrofolate Reductase: An Investigation Into Its Unique Binding Patterns, Chuanyin Shi
Theses and Dissertations in Biomedical Sciences

Influence of Irradiance and Iron on the Growth of Colonial Phaeocystic antarctica: Implications for Seasonal Bloom Dynamics in the Ross Sea, Antarctica, Nathan S. Garcia, Peter N. Sedwick, Giacomo R. DiTullio
OES Faculty Publications

DC Electrokinetic Transport of Cylindrical Cells in Straight Microchannels, Ye Ai, Ali Beskok, David T. Gauthier, Sang W. Joo, Shizhi Qian
Biological Sciences Faculty Publications

Regulation of Intracellular Calcium Concentration by Nanosecond Pulsed Electric Fields, Shaka S. Scarlett, Jody A. White, Peter F. Blackmore, Karl H. Schoenbach, Juergen Kolb
Bioelectrics Publications

Comparison of Electrically Mediated and Liposome-Complexed Plasmid DNA Delivery to the Skin, Loree C. Heller, Mark J. Jaroszeski, Domenico Coppola, Richard Heller
Bioelectrics Publications

PGE2 Receptor Subsets Mediate HCG Regulation of the Plasminogen Activator/Plasmin System in Primate Periovulatory Follicles, Nune Markosyan
Theses and Dissertations in Biomedical Sciences

Nanosecond Pulsed Electric Fields Induce a Mitochondria-Independent Apoptosis in B16F10 Melanoma Cells In Vitro, Wentia Elissa Ford
Theses and Dissertations in Biomedical Sciences

In Vivo Murine Melanoma Tumor Responses to Nanosecond Pulsed Electric Field Treatment, Xinhua Chen
Theses and Dissertations in Biomedical Sciences

MALDI Mass Spectrometry Imaging for the Discovery of Prostate Carcinoma Biomarkers, Lisa Harris Cazares
Theses and Dissertations in Biomedical Sciences

Improved Constrained Global Optimization for Estimating Molecular Structure From Atomic Distances, Terri Marie Grant
Mathematics & Statistics Theses & Dissertations

Radiocarbon Evidence for the Importance of Surface Vegetation on Fermentation and Methanogenesis in Contrasting Types of Boreal Peatlands, J. P. Chanton, P. H. Glaser, L. S. Chasar, David J. Burdige, M. E. Hines, D. I. Seigel, L. B. Tremblay, W. T. Cooper
OES Faculty Publications

Cold Atmospheric Pressure Air Plasma Jet for Medical Applications, Juergen Friedrich Kolb, A.-A H. Mohamed, R. O. Price, R. J. Swanson, A. Bowman, R. L. Chiavarini, Michael W. Stacey
Bioelectrics Publications

Naturally Present Fatty Acids as Internal Calibrants for Fourier Transform Mass Spectra of Dissolved Organic Matter, Rachel L. Sleighter, Georgina A. McKee, Zhanfei Liu, Patrick G. Hatcher
Chemistry & Biochemistry Faculty Publications