A selection of publications from researchers with the Center for Coastal Physical Oceanography, Old Dominion University. Publications listed here are either copyright of the ODU author, open access, or those for which publishers allow a version to be available in an institutional repository.
Submissions from 2012
A Shell-Neutral Modeling Approach Yields Sustainable Oyster Harvest Estimates: A Retrospective Analysis of the Louisiana State Primary Seed Grounds, Thomas M. Soniat, John M. Klinck, Eric N. Powell, Nathan Cooper, Mahdi Abdelguerfi, Eileen E. Hofmann, Janak Dahal, Shengru Tu, John Finigan, Benjamin S. Eberline, Jerome F. La Peyre, Megan K. La Peyre, and Fareed Qaddoura
Understanding the Success and Failure of Oyster Populations: Periodicities of Perkinsus Marinus, and Oyster Recruitment, Mortality, and Size, Thomas M. Soniat, John M. Klinck, Eric N. Powell, and Eileen E. Hofmann
End-to-End Models: Management Applications, John H. Steele, Eileen E. Hofmann, and Dian J. Gifford
A Conceptual Model of an Arctic Sea, P. St-Laurent, F. Straneo, and D. G. Barber
Circulation and Water Properties and Their Relationship to the Oyster Disease MSX in Delaware Bay, Zhiren Wang, Dale B. Haidvogel, David Bushek, Susan E. Ford, Eileen E. Hofmann, Eric N. Powell, and John Wilkin
Coupled Physical and Biological Modeling of Atlantic Surfclam Larval Transport and Sub-Population Connectivity in the Middle Atlantic Bight and Georges Bank, Xinzhong (Peter) Zhang, Dale B. Haidvogel, John M. Klinck, Roger Mann, and Eric N. Powell
Submissions from 2011
Marine and Terrestrial Factors Affecting Adélie Penguin Pygoscelis adeliae Chick Growth and Recruitment Off the Western Antarctic Peninsula, Erik W. Chapman, Eileen E. Hofmann, Donna L. Patterson, and Christine A. Ribic
Editorial-The 2nd International Workshop on Modeling the Ocean (IWMO-2010), Tal Ezer, Lie-Yauw Oey, Huijie Xue, and Xiao Hua Wang
Detection of the 2010 Chilean Tsunami Using Satellite Altimetry, B. D. Hamlington, R. R. Leben, O. A. Godin, J. F. Legeais, E. Gica, and V. V. Titov
Reconstructing Sea Level Using Cyclostationary Empirical Orthogonal Functions, B. D. Hamlington, R. R. Leben, R. S. Nerem, W. Han, and K.-Y. Kim
The Effect of Signal-to-Noise Ratio on the Study of Sea Level Trends, B. D. Hamlington, R. R. Leben, R. S. Nerem, and K.-Y. Kim
The US Southern Ocean Global Ocean Ecosystems Dynamics Program, Eileen E. Hofmann, John M. Klinck, Dan P. Costa, Kendra L. Daly, and Joseph J. Torres
Improving Simulations of the Upper Ocean by Inclusion of Surface Waves in the Mellor-Yamada Turbulence Scheme, Chuan Jiang Huang, Fangli Qiao, Zhenya Song, and Tal Ezer
The Potential for Oysters, Crassostrea Virginica, to Develop Resistance to Dermo Disease in the Field: Evaluation Using a Gene-Based Population Dynamics Model, Eric N. Powell, John M. Klinck, Ximing Guo, and Susan E. Ford
Application of a Gene-Based Population Dynamics Model to the Optimal Egg Size Problem: Why Do Bivalve Planktotrophic Eggs Vary in Size?, Eric N. Powell, Jason Morson, and John M. Klinck
Submissions from 2010
The Role of the Alaskan Stream in Modulating the Bering Sea Climate, Tal Ezer and Lie-Yauw Oey
Mixing by Shear Instability at High Reynolds Number, W. R. Geyer, A. C. Lavery, M. E. Scully, and J. H. Trowbridge
IOC Contributions to Science Synthesis, E. E. Hofmann and E. Gross
On the Nature of Winter Cooling and the Recent Temperature Shift on the Northern Gulf of Alaska Shelf, Markus A. Janout, Thomas J. Weingartner, Thomas C. Royer, and Seth L. Danielson
Exchange Across the Shelf Break at High Southern Latitudes, J. M. Klinck and M. S. Dinniman
Operation and Application of a Regional High-Frequency Radar Network in the Mid-Atlantic Bight, Hugh Roarty, Scott Glenn, Josh Kohut, Donglai Gong, Ethan Handel, Erick Rivera, Teresa Garner, Larry Atkinson, Wendell Brown, Chris Jakubiak, Mike Muglia, Sara Haines, and Harvey Seim
Submissions from 2009
Combining Remote Sensing Data and an Inundation Model to Map Tidal Mudflat Regions and Improve Flood Predictions: A Proof of Concept Demonstration in Cook Inlet, Alaska, Tal Ezer and Hua Liu
Profiles of Ocean surface Heating (POSH): A New Model of Upper Ocean Diurnal Warming, Chelle L. Gentemann, Peter J. Minnett, and Brian Ward
Variations in Sea Surface Roughness Induced by the 2004 Sumatra-Andaman Tsunami, O. A. Godin, V. G. Irisov, R. R. Leben, B. D. Hamlington, and G. A. Wick
Southern Ocean GLOBEC Research and the Future, Eileen Hofmann
Understanding How Disease and Environment Combine to Structure Resistance in Estuarine Bivalve Populations, Eileen E. Hofmann, David Bushek, Susan E. Ford, Ximing Guo, Dale Haidvogel, Dennis Hedgecock, John M. Klinck, Coren Milbury, Diego Narvaez, Eric Powell, Yongping Wang, Zhiren Wang, and Liusuo Zhang
Surface Deformation Induced by Present-Day Ice Melting in Svalbard, H. P. Kierulf, H.-P. Plag, and J. Kohler
Improving Oceanic Overflow Representation in Climate Models: The Gravity Current Entrainment Climate Process Team, Sonya Legg, Bruce Briegleb, Yeon Chang, Eric P. Chassignet, Gokhan Danabasoglu, Tal Ezer, Arnold L. Gordon, Stephen Griffies, Robert Hallberg, Laura Jackson, William Large, Tamay M. Ozgokmen, Hartmut Peters, Jim Price, Ulrike Riemenschneider, Wanli Wu, Xiaobiao Xu, and Jiayan Yang
ENSO and Variability of the Antarctic Peninsula Pelagic Marine Ecosystem, Valerie J. Loeb, Eileen E. Hofmann, John M. Klinck, Osmund Holm-Hansen, and Warren B. White
Multiple Stable Reference Points in Oyster Populations: Biological Relationships for the Eastern Oyster (Crassostrea virginica) in Delaware Bay, Eric N. Powell, John M. Klinck, Kathryn A. Ashton-Alcox, and John N. Kraeuter
Multiple Stable Reference Points in Oyster Populations: Implications for Reference Point-Based Management, Eric N. Powell, John M. Klinck, Kathryn A. Ashton-Alcox, and John N. Kraeuter
Submissions from 2008
Otolith Chemistry Indicates Population Structuring By The Antarctic Circumpolar Current, Julian R. Ashford, Cynthia M. Jones, Eileen E. Hofmann, Inigo Everson, Carlos A. Moreno, Guy Duhamel, and Richard Williams
On the Movement of Beluga Whales in Cook Inlet, Alaska: Simulations of Tidal and Environmental Impacts Using a Hydrodynamic Inundation Model, Tal Ezer, Roderick Hobbs, and Lie-Yauw Oey
Quantifying Vertical Mixing in Estuaries, W. Rockwell Geyer, Malcolm E. Scully, and David K. Ralston
Mesoamerican Reef Spawning Aggregations Help Maintain Fish Population: A Review of Connectivity Research and Priorities for Science Management, W. Heyman, W. B. Kjerfve, and T. Ezer
Eastern US Continental Shelf Carbon Budget Integrating Models, Data Assimilation, and Analysis, E. E. Hofmann, J. N. Druon, K. Fennel, and M. Friedrichs
Biology of the Southern Ocean, Eileen E. Hofmann
Estimation of Shelf-Slope Exchanges Induced by Frontal Instability Near Submarine Canyons, A. Jordi, John M. Klinck, G. Basterretxea, and A. Orfila
Effects of the Fishery on the Northern Quahog (=Hard Clam, Mercenaria Mercenaria L.) Population in Great South Bay, New York: A Modeling Study, John N. Kraeuter, John M. Klinck, Eric N. Powell, and Eileen E. Hofmann
Transverse Structure of Wind-Driven Flow at the Entrance to an Estuary: Nansemond River, Diego A. Narváez and Arnoldo Valle-Levinson
A Modelling Study of Developmental Stage and Environmental Variability Effects on Copepod Foraging, Jerry D. Wiggert, Eileen E. Hofmann, and Gustav-Adolf Paffenhöfer
Submissions from 2007
Influence of Sea Ice Cover and Icebergs on Circulation and Water Mass Formation in a Numerical Circulation Model of the Ross Sea, Antarctica, Michael S. Dinniman, John M. Klinck, and Walker O. Smith
Assessment of Skill and Portability in Regional Marine Biogeochemical Models: Role of Multiple Planktonic Groups, Marjorie A. M. Friedrichs, Jeffery A. Dusenberry, Laurence A. Anderson, Robert A. Armstrong, Fei Chai, James R. Christian, Scott C. Doney, John Dunne, Masahiko Fujii, and Jerry D. Wiggert
Simulation of the Recent Multidecadal Increase of Atlantic Hurricane Activity Using an 18-km-Grid Regional Model, Thomas R. Knutson, Joseph J. Sirutis, Stephen T. Garner, Isaac M. Held, and Robert E. Tuleya
Nearshore Surface Temperatures in Antofagasta Bay (Chile) and Adjacent Upwelling Centers, A. Piñones, J. C. Castilla, R. Guiñez, and J. L. Largier
Benthic Predators and Northern Quahog (=Hard Clam) (Mercenaria Mercenaria Linnaeus, 1758) Populations, Eileen Polyakov, John N. Kraeuter, Eileen E. Hofmann, and Stuart C. Buckner
Is Oyster Shell a Sustainable Estuarine Resource?, Eric N. Powell and John M. Klinck
Simulations of Phytoplankton Species and Carbon Production in the Equatorial Pacific Ocean 1. Model Configuration and Ecosystem Dynamics, Baris Salihoglu and Eileen E. Hofmann
Simulations of Phytoplankton Species and Carbon Production in the Equatorial Pacific Ocean 2. Effects of Physical and Biogeochemical Processes, Baris Salihoglu and Eileen E. Hofmann
Baroclinic Effects and Tides on the Cape Hatteras Continental Shelf, Dana K. Savidge, Catherine R. Edwards, and Mark Santana
Bottom-Up Forcing And The Decline of Steller Sea Lions (Eumetopias jubatus) In Alaska: Assessing The Ocean Climate Hypothesis, Andrew W. Trites, Arthur J. Miller, Michael A. Alexander, Steven J. Bograd, John A. Calder, Antonietta Capotondi, Kenneth O. Coyle, Emanuele Di Lorenzo, Bruce P. Finney, Edward J. Gregr, Chester E. Grosch, and Thomas C. Royer
The Sensitivity of the Southwest Monsoon Phytoplankton Bloom to Variations in Aeolian Iron Deposition over the Arabian Sea, Jerry D. Wiggert and Raghu G. Murtugudde
Submissions from 2006
A Comparison of Global Estimates of Marine Primary Production From Ocean Color, Mary-Elena Carr, Marjorie A. M. Friedrichs, Marjorie Schmeltz, Maki Noguchi Aita, David Antoine, Kevin R. Arrigo, Ichio Asanuma, Oliver Aumont, Richard Barber, and Michael Behrenfeld
Transport of Antarctic Krill (Euphausia superba) Across the Scotia Sea. Part II: Krill Growth and Survival, Bettina A. Fach, Eileen E. Hofmann, and Eugene J. Murphy
Population Dynamics Model of the Hard Clam, Mercenaria Mercenaria: Development of the Age- and Length-Frequency Structure of the Population, Eileen E. Hofmann, John M. Klinck, John N. Kraeuter, and Eric N. Powell
Pelagic Functional Group Modeling: Progress, Challenges and Prospects, Raleigh R. Hood, Edward A. Laws, Robert A. Armstrong, Nicholas R. Bates, Christopher W. Brown, Craig A. Carlson, Fei Chai, Scott C. Doney, Paul G. Falkowski, Richard A. Feely, and Marjorie A. M. Friedrichs
Loop Current Warming by Hurricane Wilma, Lie-Yauw Oey, Tal Ezer, Dong-Ping Wang, S. J. Fan, and Xun-Qiang Yin
A Temporal Approximate Deconvolution Model for Large-Eddy Simulation, C. D. Pruett, B. C. Thomas, C. E. Grosch, and T. B. Gatski
Ocean Warming and Freshening in the Northern Gulf of Alaska, Thomas C. Royer and Chester E. Grosch
Inter-Annual Sea Level Variability in the Southern Gulf of Mexico (1966-1976), David Alberto Salas-de-León, Maria Adela Monreal-Gómez, David Salas-Monreal, Mayra Lorena Riveron-Enzastiga, and Norma Leticia Sánchez-Santillan
A Geophysical Interpretation of the Secular Displacement and Gravity Rates Observed at Ny-Ålesund, Svalbard in the Arctic— Effects of Post-Glacial Rebound and Present-Day Ice Melting, Tadahiro Sato, Jun'ichi Okuno, Jacques Hinderer, Daniel S. MacMillan, Hans-Peter Plag, Olivier Francis, Reinhard Falk, and Yoichi Fukuda
Understanding the Success and Failure of Oyster Populations: Climatic Cycles and Perkinsus Marinus, Thomas M. Soniat, John M. Klinck, Eric N. Powell, and Eileen E. Hofmann
Vertical Distribution of Decapod Larvae in the Entrance of an Equatorward Facing Bay of Central Chile: Implications for Transport, Beatriz Yannicelli, Leonardo R. Castro, Arnoldo Valle-Levinson, Larry Atkinson, and Dante Figueroa
Submissions from 2005
Can Otolith Elemental Signatures Record The Capture Site of Patagonian toothfish (Dissostichus eleginoides), a Fully Marine Fish in the Southern Ocean?, J. R. Ashford, C. M. Jones, E. Hofmann, I. Everson, C. Moreno, G. Duhamel, and R. Williams
Circulation, Mixing and the Distribution of Remineralized Nutrients, Larry P. Atkinson, John Huthnance, and Jose L. Blanco
Evaluation and Derivation of Cloud-Cover Algorithms for Calculation of Surface Irradiance in Sub-Antarctic and Antarctic Environments, Hae-Cheol Kim and Eileen E. Hofmann
An Exercise in Forecasting Loop Current and Eddy Frontal Positions in the Gulf of Mexico, Lie-Yauw Oey, Tal Ezer, George Forristall, C. Cooper, Steven DiMarco, and S. Fan
Seasonal Variability of Near-Surface Hydrography and Frontal Features in the Northern Gulf of Alaska and Prince William Sound, Stephen R. Okkonen, David L. Cutchin, and Thomas Royer
Absorption and Backscattering in the Beaufort and Chukchi Seas, Jian Wang, Glenn F. Cota, and David A. Ruble
The Role of Feeding Behavior in Sustaining Copepod Populations in the Tropical Ocean, J. D. Wiggert, A. G. E. Haskell, G.-A. Paffenhofer, E. E. Hofmann, and J. M. Klinck
Submissions from 2004
Satellite Evidence of Hurricane-Induced Phytoplankton Blooms in an Oceanic Desert, S. M. Babin, J. A. Carton, T. D. Dickey, and J. D. Wiggert
Numerical Study of the Diapycnal Flow Through a Tidal Front With Passive Tracers, Chingming Dong, Robert Houghton, Hsien-Wang Ou, Dake Chen, and Tal Ezer
Simulations of the Influence of the West Caribbean Sea Circulation and Eddies on the Meso-American Barrier Reef System, Tal Ezer, Deeptha V. Thattai, and Björn Kjerve
Lagrangian Modelling Studies of Antarctic Krill (Euphausia superba) Swarm Formation, Eileen E. Hofmann, A. G. Edward Haskell, John M. Klinck, and Cathy M. Lascara
Advection, Krill, and Antarctic Marine Ecosystems, Eileen E. Hofmann and Eugene J. Murphy
A Modelling Study of the Influence of Environment and Food Supply on Survival of Crassostrea gigas Larvae, Eileen E. Hofmann, Eric N. Powell, Eleanor A. Bochenek, and John M. Klinck
Estimation of Drag Coefficient in James River Estuary Using Tidal Velocity Data from a Vessel-Towed ADCP, Chunyan Li, Arnoldo Valle-Levinson, Larry P. Atkinson, Kuo Chuin Wong, and Kamazima M. M. Lwiza
Modeled and Observed Empirical Orthogonal Functions of Currents in the Yucatan Channel, Gulf of Mexico, Lie-Yauw Oey, Tal Ezer, and Wilton Sturges
Influence of Short-Term Variations in Food on Survival of Crassotrea Gigas Larvae: A Modeling Study, Eric N. Powell; Eleanor A, Bochenek; John M. Klinck; and Eileen E. Hofmann
On the Sensitivity of the West Caribbean Sea Circulation to Tides, Wind, and Mesoscale Ocean Eddies: A Three-Dimensional Ocean Model Study, Deeptha V. Thattai, Tal Ezer, and Bjorn Kjerfve
Submissions from 2003
On Vertical Advection Truncation Errors in Terrain-Following Numerical Models: Comparison to a Laboratory Model for Upwelling Over Submarine Canyons, S. E. Allen, M. S. Dinniman, J. M. Klinck, and D. D. Gorby
Academic Fleet Renewal- Two Years Later, Larry Atkinson
Observations of Cross Channel Structure of Flow in an Energetic Tidal Channel, Mario Caceres, Arnoldo Valle-Levinson, and Larry P. Atkinson
Bio-Optical Properties of the Labrador Sea, Glenn F. Cota, W. Glen Harrison, Trevor Platt, Shubha Sathyendranath, and Venetia Stuart
The Variability of Currents in the Yucatan Channel: Analysis of Results from a Numerical Ocean Model, Tal Ezer, Lie-Yauw Oey, Hyun-Chul Lee, and Wilton Sturges
A Predator's Perspective on Causal Links Between Climate Change, Physical Forcing and Ecosystem Response, William R. Fraser and Eileen E. Hofmann
The Temporally Filtered Navier-Stokes Equations: Propertes of the Residual Stress, C. D. Pruett, T. B. Gatski, Chester E. Grosch, and W. D. Thacker
Strong Mid-Depth Currents and a Deep Cyclonic Gyre in the Gulf of Mexico, Wilton Sturges, Eric Chassignet, and Tal Ezer
Flow Induced by Upwelling Winds in an Equatorward Facing Bay: Gulf of Arauco, Chile, Arnoldo Valle-Levinson, Larry P. Atkinson, Dante Figueroa, and Leonardo Castro
Reversing Circulation Patterns in a Tropical Estuary, Arnoldo Valle-Levinson and Kathryn T. Bosley
Near-Surface Currents in DeSoto Canyon (1997–99): Comparison of Current Meters, Satellite Observation, and Model Simulation, Dong-Ping Wang, Lie-Yauw Oey, Tal Ezer, and Peter Hamilton
Submissions from 2002
Oceanographic Observations in Chilean Coastal Waters Between Valdivia and Concepcion, Larry P. Atkinson, Arnoldo Valle-Levinson, Dante Figueroa, Ricardo De Pol-Holz, Victor A. Gallardo, Wolfgang Schneider, Jose L. Blanco, and Mike Schmidt
Estimating the Mean Ocean-Bay Exchange Rate of the Chesapeake Bay, Jay A. Austin
Variation in the Position of the Upwelling Front on the Oregon Shelf, Jay A. Austin and John A. Barth
Response of Anchovy (Engaulis ringens) off Northern Chile to the 1997-1999 El Niño-La Niña Sequence, José L. Blanco, Patricio Barria, Jorge Castillo, and Larry P. Atkinson
Hydrographic Conditions off Northern Chile During the 1996-1998 La Niña and El Niño Events, Jose Luis Blanco, Mary-Elena Carr, Andrew C. Thomas, and P. Ted Strub
Testing Ocean Tide Models in the Nordic Seas with Tidal Gravity Observations, M. S. Bos, T. F. Baker, K. Rothing, and Hans-Peter Plag
The Influence of Open Versus Periodic Alongshore Boundaries on Circulation Near Submarine Canyons, Michael S. Dinniman and John M. Klinck