A selection of faculty publications from the Department of Ocean & Earth Sciences, College of Sciences, Old Dominion University.

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Submissions from 2016

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Preferential Depletion of Zinc Within Costa Rica Upwelling Dome Creates Conditions for Zinc Co-Limitation of Primary Production, P. Dreux Chappell, Jagruti Vedmati, Karen E. Selph, Heather A. Cyr, Bethany D. Jenkins, Michael R. Landry, and James W. Moffett

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Coastal Ocean and Shelf-Sea Biogeochemical Cycling of Trace Elements and Isotopes: Lessons Learned from GEOTRACES, Matthew A. Charette, Phoebe J. Lam, Maeve C. Lohan, Eun Young Kwon, Vanessa Hatje, Catherine Jeandel, Alan M. Shiller, Gregory A. Cutter, Alex Thomas, and Philip W. Boyd

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A Tribute to Thomas M. Church: Exploring Chemical Oceanography in the Coastal Zone-The History and Future, Gregory A. Cutter and David J. Burdige

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Dynamics of Plume-Triple Junction Interaction: Results from a Series of Three-Dimensional Numerical Models and Implications for the Formation of Oceanic Plateaus, Mladen Dordevic and Jennifer Georgen

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Can the Gulf Stream Induce Coherent Short-Term Fluctuations in Sea level along the US East Coast?: A Modeling Study, Tal Ezer

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Is the Detection of Accelerated Sea Level Rise Imminent?, J. T. Fasullo, R. S. Nerem, and B. Hamlington

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Assessing the Impact of Vertical Land Motion on Twentieth Century Global Mean Sea Level Estimates, B. D. Hamlington, P. Thompson, W. C. Hammond, G. Blewitt, and R. D. Ray

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Benthic Fluxes of Dissolved Organic Carbon from Gas Hydrate Sediments in the Northern South China Sea, Chia Wei Hung, Kuo Hao Huang, Yung Yen Shih, Yu Shih Lin, Hsin Hung Chen, Chau Chang Wang, Chuang Yi Ho, Chin Chang Hung, and David J. Burdige

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Using Rare Earth Elements to Constrain Particulate Organic Carbon Flux in the East China Sea, Chin-Chang Hung, Ya-Feng Chen, Shih-Chieh Hsu, Kui Wang, Jianfang Chen, and David J. Burdige

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A Highly Sensitive Underwater Video System for Use in Turbid Aquaculture Ponds, Chin-Chang Hung, Shih-Chieh Tsao, Kuo-Hao Huang, Hsu-Kunag Chang, and Fred C. Dobbs

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A Highly Sensitive Underwater Video System For Use in Turbid Aquaculture Ponds, Chin-Chang Hung, Shih-Chieh Tsao, Kuo-Hao Huang, Jia-Pu Jang, Hsu-Kuang Chang, and Fred C. Dobbs

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Effects of Temperature, Irradiance and pCO2 on the Growth and Nitrogen Utilization of Prorocentrum Donghaiense, Zhangxi Hu, Margaret R. Mulholland, Ning Xu, and Shunshan Duan

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Experimental Demonstration of an Allee Effect in Microbial Populations, RajReni B. Kaul, Andrew M. Kramer, Fred C. Dobbs, and John M. Drake

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Mechanism of Seasonal Arctic Sea Ice Evolution and Arctic Amplification, Kwang-Yul Kim, Benjamin D. Hamlington, Hanna Na, and Jinju Kim

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The Contribution of Marine Aggregate-Associated Bacteria to the Accumulation of Pathogenic Bacteria in Oysters: An Agent-Based Model, Andrew M. Kramer, J. Evan Ward, Fred C. Dobbs, and Melissa L. Pierce

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An Alignment-Free "Metapeptide" Strategy for Metaproteomic Characterization of Microbiome Samples Using Shotgun Metagenomic Sequencing, Damon H. May, Emma Timmins-Schiffman, Molly P. Mikan, H. Rodger Harvey, Elhanan Borenstein, Brook L. Nunn, and William S. Noble

Submissions from 2015

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Understanding Ocean Acidification Impacts on Organismal to Ecological Scales, Andreas J. Andersson, David I. Kline, Peter J. Edmunds, Stephen D. Archer, Nina Bednarsek, Robert C. Carpenter, Meg Chadsey, Philip Goldstein, Andrea G. Grottoli, Thomas P. Hurst, Andrew L. King, Janet E. Kübler, Ilsa B. Kuffner, Katherine R.M. mackey, Bruce A. Menge, Adina Paytan, Ulf Riebesell, Astrid Schnetzer, Mark E. Warner, and Richard C. Zimmerman

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New Tracer to Estimate Community Predation Rates of Phagotrophic Protists, Alexander B. Bochdansky and Melissa A. Clouse

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Genetic Indicators of Iron Limitation in Wild Populations of Thalassiosira oceanica From the Northeast Pacific Ocean, P. Dreux Chappell, LeAnn P. Whitney, Joselynn R. Wallace, Adam I. Darer, Samua Jean-Charles, and Bethany D. Jenkins

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Submarine Groundwater Discharge of Rare Earth Elements to a Tidally-Mixed Estuary in Southern Rhode Island, Darren A. Chevis, Karen H. Johannesson, David J. Burdige, Jianwu Tang, S. Bradley Moran, and Roger P. Kelly

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Failure of the Public Health Testing Program for Ballast Water Treatment Systems, Andrew N. Cohen and Fred C. Dobbs

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The Relative Importance of Methanogenesis in the Decomposition of Organic Matter in Northern Peatlands, J. Elizabeth Corbett, Malak M. Tfaily, David J. Burdige, Paul H. Glaser, and Jeffrey P. Chanton

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ODU-European Collaborations on Climate Change and Sea Level Rise Reserach, Tal Ezer

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Sea Level Rise in Virginia – Causes, Effects and Response, Tal Ezer and Larry P. Atkinson

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Iron Deficiency Increases Growth and Nitrogen-Fixation Rates of Phosphorus-Deficient Marine Cyanobacteria, Nathan S. Garcia, Feixue Fu, Peter N. Sedwick, and David A. Hutchins

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Living on the Margin in the Anthropocene: Engagement Arenas for Sustainability Research and Action at the Ocean-Land Interface, B. C. Glavovic, K. Limburg, K-K. Liu, K-C. Emeis, H. Thomas, H. Kremer, B. Avril, J. Zhang, M. R. Mulholland, M. Glaser, and D. P. Swaney

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The Effect of the El Nino-Southern Oscillation on U.S. Regional and Coastal Sea Level, B. D. Hamlington, R. R. Leben, K. -Y. Kim, R. S. Nerem, L. P. Atkinson, and P. R. Thompson

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Divergent Responses of Atlantic Coastal and Oceanic Synechococcus to Iron Limitation, Katherine R. M. Mackey, Anton F. Post, Matthew R. McIlvin, Gregory A. Cutter, Seth G. John, and Mak A. Saito

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The GEOTRACES Intermediate Data Product 2014, Edward Mawji, Reiner Schlitzer, Elena M. Dodas, Cyril Abadie, Wafa Abouchami, Robert F. Anderson, and Gregory A. Cutter

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Iron Supply and Demand in Antarctic Shelf Ecosystem, D. J. McGillicuddy Jr., Peter N. Sedwick, Michael S. Dinniman, K. R. Arrigo, T. S. Bibby, B. J. W. Greenan, Eileen E. Hofmann, John M. Klinck, W. O. Smith Jr., S. L. Mack, C. M. Marsay, B. M. Sohst, and G. L. van Dijken

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Predicting Carbon Isotope Discrimination in Eelgrass (Zostera marina L.) From the Environmental Parameters- Light, Flow, and [DIC], Meredith L. McPherson, Richard C. Zimmerman, and Victoria J. Hill

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Tropical North Atlantic Subsurface Warming Events as a Fingerprint for AMOC Variability During Marine Isotope Stage 3, Andrew O. Parker, Matthew W. Schmidt, and Ping Chang

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Interpretation of Complexometric Titration Data: An Intercomparison of Methods for Estimating Models of Trace Metal Complexation by Natural Organic Ligands, I. Pižeta, S. G. Sander, R. J. M. Hudson, D. Omanović, O. Baars, K. A. Barbeau, K. N. Buck, R. M. Bundy, G. Carrasco, and P. L. Croot

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Heterotrophic and Autotrophic Contribution to Dinitrogen Fixation in the Gulf of Aqaba, Eyal Rahav, Barak Herut, Margaret R. Mulholland, Natalia Belkin, Hila Elifantz, and Ilana Berman-Frank

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The Influence of Sea Ice and Snow Cover and Nutrient Availability on the Formation of Massive Under-Ice Phytoplankton Blooms in the Chukchi Sea, Jinlun Zhang, Carin Ashjian, Robert Campbell, Yvette H. Spitz, Michael Steele, and Victoria Hill

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Predicting Effects of Ocean Warming, Acidification, and Water Quality on Chesapeake Region Eelgrass, Richard C. Zimmerman, Victoria J. Hill, and Charles L. Gallegos

Submissions from 2014

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GEOTRACES: Changing the Way We Explore Ocean Chemistry, Robert F. Anderson, Edward Mawji, Gregory A. Cutter, Christopher I. Measures, and Catherine Jeandel

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Editorial-The 5th International Workshop on Modeling the Ocean (IWMO 2013), Jarle Berntsen, Lie-Yauw Oey, Tal Ezer, Richard Greatbatch, Huijie Xue, and Yasumasa Miyazawa

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Emergence of Algal Blooms: The Effects of Short-Term Variability in Water Quality on Phytoplankton Abundance, Diversity, and Community Composition in a Tidal Estuary, Todd A. Egerton, Ryan E. Morse, Harold G. Marshall, and Margaret R. Mulholland

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Accelerated Flooding Along the U.S. East Coast: On the Impact of Sea-Level Rise, Tides, Storms, the Gulf Stream, and the North Atlantic Oscillations, Tal Ezer and Larry P. Atkinson

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The Impact of Changing Surface Ocean Conditions on the Dissolution of Aerosol Iron, Matthew P. Fishwick, Peter N. Sedwick, Maeve C. Lohan, Paul J. Worsfold, Kristen N. Buck, Thomas M. Church, and Simon J. Ussher

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Growth and Nitrogen Uptake Kinetics in Cultured Procentrum donghaiense, Zhangxi Hu, Shunshan Duan, and Margaret R. Mulholland

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Can We Predict the Future: Juvenile Finfish and Their Seagrass Nurseries in the Chesapeake Bay, Cynthia M. Jones

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Lack of Equivalence in the Elemental and Stable Isotope Chemistry Within the Sagittal Otolith Pair of the Summer Flounder, Paralichthys dentatus, Antranik Kajajian, Jason J. Schaffler, and Cynthia M. Jones

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Estimating the Benthic Efflux of Dissolved Iron on the Ross Sea Continental Shelf, C. M. Marsay, P. N. Sedwick, M. S. Dinniman, P. M. Barrett, S. L. Mack, and D. J. McGillicuddy Jr.

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Protein Recycling in Bering Sea Algal Incubations, Eli K. Moore, H. Rodger Harvey, Jessica F. Faux, David R. Goodlett, and Brook L. Nunn

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Phytoplankton and Nutrient Dynamics in a Tidally Dominated Eutrophic Estuary: Daily Variability and Controls on Bloom Formation, Ryan E. Morse, Margaret R. Mulholland, Todd A. Egerton, and Harold G. Marshall

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Detection of Seagrass Scars Using Sparse Coding and Morphological Filter, Ender Oguslu, Sertan Erkanli, Victoria J. Hill, W. Paul Bissett, Richard C. Zimmerman, Jiang Li, Charles R. Bostater Jr. (Ed.), Stelios P. Mertikas (Ed.), and Xavier Neyt (Ed.)

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False Positives in Biolog EcoPlates (TM) and MT2 MicroPlates (TM) Caused by Calcium, Melissa L. Pierce, J. Evan Ward, and Fred C. Dobbs

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Reproductive Phase Determination in Male Meagre (Argyrosomus regius, Sciaenidae): Testis Development and Histologic Corroboration of a Gross Anatomical Scale, Nuno Prista, Leonel Gordo, Jose L. Costa, Maria J. Costa, and Cynthia M. Jones

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Reproductive Phase Determination in Male Meagre (Argyrosomus regius, Sciaenidae): Testis Development and Histologic Corroboration of a Gross Anatomical Scale, Nuno Prista, Leonel Gordo, José Lino Costa, Maria José Costa, and Cynthia Jones

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The Great 2012 Arctic Ocean Summer Cyclone Enhanced Biological Productivity on the Shelves, Jinlun Zhang, Carin Ashjian, Robert Campbell, Victoria Hill, Yvette H. Spitz, and Michael Steele

Submissions from 2013

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Processes That Affect Stratification in Shelf Waters, Larry P. Atkinson and Jackson O. Blanton

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Sea Level Rise and Flooding Risk in Virginia, Larry P. Atkinson, Tal Ezer, and Elizabeth Smith

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Development and Deployment of a Point-Source Digital Inline Holographic Microscope for the Study of Plankton and Particles to a Depth of 6000 m, Alexander B. Bochdansky, Manfred H. Jericho, and Gerhard J. Herndl

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Updating Maryland's Sea-level Rise Projections, Donald F. Boesch, Larry P. Atkinson, William C. Boicourt, John D. Boon, Donald R. Cahoon, Robert A. Dalrymple, Tal Ezer, Benjamin P. Horton, Zoe P. Johnson, Robert E. Kopp, Ming Li, Richard H. Moss, Adam Parris, and Christopher K. Sommerfield

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Marine Phytoplankton Temperature versus Growth Responses from Polar to Tropical Waters- Outcome of a Scientific Community-Wide Study, Philip W. Boyd, Tatiana A. Rynearson, Evelyn A. Armstrong, Feixue Fu, Kendra Hayashi, Zhangxi Hu, David A. Hutchins, Elena Litchman, Margaret R. Mulholland, Uta Passow, Robert F. Stzepek, Kerry A. Whittaker, Elizabeth Yu, and Mridul K. Thomas

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Using Ammonium Pore Water Profiles to Assess Stoichiometry of Deep Remineralization Processes in Methanogenic Continental Margin Sediments, David J. Burdige and Tomoko Komada

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Surface Production Fuels Deep Heterotrophic Respiration in Northern Peatlands, J. Elizabeth Corbett, David J. Burdige, Malak M. Tfaily, Angela R. Dial, William T. Cooper, Paul H. Glaser, and Jeffrey P. Chanton

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Intercalibraton in Chemical Oceanography-- Getting The Right Number, Gregory A. Cutter

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The Connection Between Local Sea Level Rise, Climate Change and Ocean Circulation, Tal Ezer and Larry P. Atkinson

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Gulf Stream's Induced Sea Level Rise and Variability along the U.S. Mid-Atlantic Coast, Tal Ezer, Larry P. Atkinson, William B. Corlett, and Jose L. Blanco

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Combined Effects of CO2 and Light on Large and Small Isolates of the Unicellular N2-Fixing Cyanobacterium Crocosphaera watsonii From the Western Tropical Atlantic Ocean, Nathan S. Garcia, Fei-Xue Fu, Cynthia L. Breene, Elizabeth K. Yu, Peter W. Bernhardt, Margaret R. Mulholland, and David A. Hutchins

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Distributions of Particulate Heme b in the Atlantic and Southern Oceans- Implications for Electron Transport in Phytoplankton, Martha Gledhill, Eric P. Achterberg, David J. Honey, Maria C. Nielsdottir, and Micha J.A. Rijkenberg

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Effect of Laser Ablation Depth in Otolith Life History Scans, Renée R. Hoover and Cynthia M. Jones

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Bacterial Colonization and Extinction on Marine Aggregates: Stochastic Model of Species Presence and Abundance, Andrew M. Kramer, M. Maille Lyons, Fred C. Dobbs, and John M. Drake

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Wintering Eiders Acquire Exceptional Se and Cd Burdens in the Bering Sea: Physiological and Oceanographic Factors, James R. Lovvorn, Merl F. Raisbeck, Lee W. Cooper, Gregory A. Cutter, Micah W. Miller, Marjorie L. Brooks, Jacqueline M. Grebmeier, Angela C. Matz, and Cortney M. Schaefer

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Phosphorus Cycling in the Sargasso Sea: Investigation Using the Oxygen Isotopic Composition of Phosphate, Enzyme-Labeled Fluorescence, and Turnover Times, Karen McLaughlin, Jill A. Sohm, Gregory A. Cutter, Michael W. Lomas, and Adina Paytan

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Stromatolites and MISS—Differences Between Relatives, N. Noffke and S. M. Awramik

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Microbially Induced Sedimentary Structures Recording an Ancient Ecosystem in the ca. 3.48 Billion-Year-Old Dresser Formation, Pilbara, Western Australia, Nora Noffke, Daniel Christian, David Wacey, and Robert M. Hazen

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Diatom Proteomics Reveals Unique Acclimation Strategies to Mitigate Fe Limitation, Brook L. Nunn, Jessica F. Faux, Anna A. Hippman, Maria T. Maldonado, H. Rodger Harvey, David R. Goodlett, Philip W. Boyd, and Robert F. Strzepek

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Editorial-The 4th International Workshop on Modeling the Ocean (IWMO 2012), Lie-Yauw Oey, Yasumasa Miyazawa, Hidenori Aiki, Yukio Masumoto, Tal Ezer, and Takuji Waseda

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Springtime Contribution of Dinitrogen Fixation to Primary Production Across the Mediterranean Sea, E. Rahav, B. Herut, A. Levi, Margaret Mulholland, and I. Berman-Frank

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Dinitrogen Fixation in Aphotic Oxygenated Marine Environments, Eyal Rahav, Edo Bar-Zeev, Sarah Ohayon, Hila Elifantz, Natalia Belkin, Barak Herut, Margaret R. Mulholland, and IIana Berman-Frank

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Uncoupling Between Dinitrogen Fixation and Primary Productivity in the Eastern Mediterranean Sea, Eyal Rahav, Barak Herut, Noga Stambler, Edo Bar-Zeev, and Margaret R. Mulholland

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Fish Species Distribution in Seagrass Habitats of Chesapeake Bay Are Structured by Abiotic and Biotic Factors, Jason J. Schaffler, Jacques van Montfrans, Cynthia M. Jones, and Robert J. Orth

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Arsenic and Phosphorus Biogeochemistry in the Ocean: Arsenic Species as Proxies for P-Limitation, Oliver Wurl, Louise Zimmer, and Gregory A. Cutter

Submissions from 2012

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Rapid and Noncontaminating Sampling System For Trace Elements in Global Ocean Surveys, Gregory A. Cutter and Kenneth W. Bruland

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Introduction to Special Section on Recent Advances in the Study of Optical Variability in the Near-Surface and Upper Ocean, T. Dickey, M. L. Banner, P. Bhandari, T. Boyd, L. Carvalho, and O. Wurl

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An Introduction to Ecology of Infectious Diseases - Oysters and Estuaries, Eileen E. Hofmann and Susan E. Ford

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Novel Lineages of Prochlorococcus and Synechococcus in the Global Oceans, Sijun Huang, Steven W. Wilhelm, H. Rodger Harvey, Karen Taylor, Nianzhi Jiao, and Feng Chen

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δ13C Is a Signature of Light Availability and Photosynthesis in Seagrass, Xingping Hu, David J. Burdige, and Richard C. Zimmerman

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Diversity, Distribution, and Expression of Diazotroph nifH Genes in Oxygen-Deficient Waters of the Arabian Sea, Amal Jayakumar, Mamoon M. D. Al-Rshadat, Bess B. Ward, and Margaret R. Mulholland

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Database of Diazotrophs in Global Ocean: Abundance, Biomass, and Nitrogen Fixation Rates, Y. W. Luo, S. C. Doney, L. A. Anderson, M. Benavides, I. Berman-Frank, A. Bode, S. Bonnet, K. H. Boström, D. Böttjer, D. G. Capone, and M. R. Mulholland

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Evaluation of Electrophoretic Protein Extraction and Database-Driven Protein Identification from Marine Sediments, Eli K. Moore, Brook L. Nunn, Jessica F. Faux, David R. Goodlett, and H. Rodger Harvey

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Identifying and Tracking Proteins Through the Marine Water Column: Insights Into the Inputs and Preservation Mechanisms of Protein in Sediments, Eli K. Moore, Brook L. Nunn, David R. Goodlett, and H. Rodger Harvey

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The Role of Larval Dispersal in Metapopulation Gene Flow: Local Population Dynamics Matter, Daphne M. Munroe, John M. Klinck, Eileen E. Hofmann, and Eric N. Powell

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Impact of Abrupt Deglacial Climate Change on Tropical Atlantic Subsurface Temperatures, Matthew W. Schmidt, Ping Chang, Jennifer E. Hertzberg, Theodore R. Them II, Link Li, and Bette L. Otto-Bliesner

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Solar Forcing of Florida Straits Surface Salinity During the Early Holocene, Matthew W. Schmidt, William A. Weinlein, Franco Marcantonio, and Jean Lynch-Stieglitz

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Controls on Dissolved Cobalt in Surface Waters of the Sargasso Sea: Comparisons with Iron and Aluminum, R. U. Shelley, Peter N. Sedwick, T. S. Bibby, P. Cabedo-Sanz, T. M. Church, R. J. Johnson, A. I. Macey, C. M. Marsay, E. R. Sholkovitz, S. J. Ussher, P. J. Worsfold, and M. C. Lohan

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The Ross Sea: In a Sea of Change, Walker O. Smith, Peter N. Sedwick, Kevin R. Arrigo, David G. Ainley, and Alejandro H. Orsi

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Decorin Expression, Straw-Like Structure, and Differentiation of Human Costal Cartilage, Michael W. Stacey, Janna Grubb, Anthony Asmar, Julie Pryor, Hani Elsayed-Ali, Ali Beskok, Diganta Dutta, Annie Fecteau, Alice Werner, Dennis A. Darby, and Robert Kelly

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Glacial Shortcut of Arctic Sea-Ice Transport, Michael Stärz, Xun Gong, Rüdiger Stein, Dennis A. Darby, Frank Kauker, and Gerrit Lohmann

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Deglacial Variability of Antarctic Intermediate Water Penetration into the North Atlantic from Authigenic Neodymium Isotope Ratios, Ruifang C. Xie, Franco Marcantonio, and Matthew W. Schmidt

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High Resolution Determination of Nanomolar Concentrations of Dissolved Reactive Phosphate in Ocean Surface Waters Using Long Path Liquid Waveguide Capillary Cells (LWCC) and Spectrometric Detection, Louise A. Zimmer and Gregory A. Cutter

Submissions from 2011

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Iron Limitation of a Springtime Bacterial and Phytoplankton Community in the Ross Sea: Implications for Vitamin B12 Nutrition, Erin M. Bertrand, Mak A. Saito, Peter A. Lee, Robert B. Dunbar, Peter N. Sedwick, and Giacomo R. DiTullio

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Cascading Migrations and Implications for Vertical Fluxes in Pelagic Ecosystems, Stephen M. Bollens, Gretchen Rollwagen-Bollens, Joel A. Quenette, and Alexander B. Bochdansky

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Anaerobic Oxidation of Methane and the Stoichiometry of Remineralization Processes in Continental Margin Sediments, David J. Burdige and Tomoko Kamada

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Modern Dirty Sea Ice Characteristics and Sources: The Role of Anchor Ice, Dennis A. Darby, Wesley B. Myers, Martin Jakobsson, and Ignatius Rigor

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Lithospheric Control on the Spatial Pattern of Azores Hotspot Seafloor Anomalies: Constraints from a Model of Plume-Triple Junction Interaction, Jennifer E. Georgen